Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0847 ATGGTATCGTCTCATGGGAATGCACACTCGGATACTGCAAGGATGGAACAAATAATCACTGAATTTTTTGCGAAAAGTGTTCATATAATACTTGAATCGAGGGCACTTTACGCGTCCTCGCGTAATTCATATGGTGGTTATAAATCAGATTCATCGTCTTCTTCGTCCTCATCCAGTGTTAGGCCGAGGGATAAATGGTTCAATTTGGCACTTCGGGAGTGTCCAGTGGCGTTAGAGAATATTAACAATCACGAGTGTGTTATTGTTGATGTGATTTTGGTTCATAGGTCTCTAGATTGGGATCCCATGATCACAAAAAAGGTTCTTTGTAAAGAAAGATATCCACTTTGCTGCAGTGGGGCAGAATTGGGGGTTGACGCGAAGAGTGAAAAGATTGTAGAGAGATGGATTGTGCAGTATGAGAATGGGAAGAAGATAAAGAATTCTAATTTAGGCACTAGAAGGTCAAGTAACAATTCCTTGCAAAACTTGTATAAGAAATCAACGTTACTTTTGAGGTCTTTGTATGCTACAGTTAGACTTTTACCTGCATATAAAACTTTTAGAGATCTTAATTCGTCTGCACATATTCGTCCCTTTACCCTTGCTCACCGGGTGTCTTCTTTTGTTGAGCCGTTCACCCGAAAACAAGAGTCAGAAATGATGAAATATAGGTTTACTCCTGTGGATACTTCTTCTGGTAGGCTCTGTCTTACGGTGATGTATTGTCCTACGGCCTCGGATTTGAGCTGTGAGCAATTACCTTCTATGTCCCCTCAAGTTATTTCTGACTATGTTGGAAGTCCATTAGCTTCTCCATTGAGGAGGTTCCCATCACTTCCTTTGTCGGGATTGCCATGTCACGGCTGTTCGTCGCCAAGGCGACATAGTTGGAATTTTGATGACAGTAAAGCCTCATCTACTTACATTAATGATTCATCTTTGCCTCTACATTCAAAATCACAAATATTATTGTCTAATACAAGTTCGCGGCTGCATGATTTGCCACCAAATCCTCACTTAAGAGGTTCAAGGTGTACTTATAAGATTGATAGAAATACAAATGTGATGCAAACTGGTGCTACATCTGAGAAGGTGTTTTCTCTAGGAAAAGATGAGCTCCAAAAAAATTCTGGAGTCAGGATATCAGCTAACAGCTTTCCGTTTCCACGTATTTCAATTTCCAGTAGGTTTTACCTGGATGATTTTGATGATACTGATTTTAGTTGTCCATTTGATGTGGATAATGATGATATGAAGAATCCAGGAAGCAGAACAAAATCTTTAGATCGTGGTCATGTGGCTGAGGCACTTGAAGCTGGAGGATTCTTTCCCATCAGAAAGTCCAATTATGCTGCTGTCGGTGCGCTTGTACATATGCTGAAGAAAGCACCACCTCTCCATCAAGATTTTTACACTTCTGAACACCCGTCAGTACAATGTGGAGGGCTGCGACTAACAGCAATTCCCTCATTGAGAGATAATCGCACAACTAAACCTATGAAGATATCCGTTCAGAAACCAAATAAAGAAAACCTATCGCATGGCACACACTGTGAAACTCGGAACAACATTCAAGAACTCAATAAGAACCAACAGGCATCCATATCAACTAGGAAAACAACAAGGGATGCATTGGAAGAGTTCCATGGTTACAGGGAGATGAAAAACTTGTTGGTTATGCGAGATATTAAACCACAGATATAA 1707 0.4048 MVSSHGNAHSDTARMEQIITEFFAKSVHIILESRALYASSRNSYGGYKSDSSSSSSSSSVRPRDKWFNLALRECPVALENINNHECVIVDVILVHRSLDWDPMITKKVLCKERYPLCCSGAELGVDAKSEKIVERWIVQYENGKKIKNSNLGTRRSSNNSLQNLYKKSTLLLRSLYATVRLLPAYKTFRDLNSSAHIRPFTLAHRVSSFVEPFTRKQESEMMKYRFTPVDTSSGRLCLTVMYCPTASDLSCEQLPSMSPQVISDYVGSPLASPLRRFPSLPLSGLPCHGCSSPRRHSWNFDDSKASSTYINDSSLPLHSKSQILLSNTSSRLHDLPPNPHLRGSRCTYKIDRNTNVMQTGATSEKVFSLGKDELQKNSGVRISANSFPFPRISISSRFYLDDFDDTDFSCPFDVDNDDMKNPGSRTKSLDRGHVAEALEAGGFFPIRKSNYAAVGALVHMLKKAPPLHQDFYTSEHPSVQCGGLRLTAIPSLRDNRTTKPMKISVQKPNKENLSHGTHCETRNNIQELNKNQQASISTRKTTRDALEEFHGYREMKNLLVMRDIKPQI* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0847 568 Pfam Autophagy-related protein 13 19 242 IPR018731 GO:0006914|GO:1990316
Tpr3g0847 568 PANTHER UNCHARACTERIZED 351 560 IPR040182 GO:0000045
Tpr3g0847 568 PANTHER UNCHARACTERIZED 9 337 IPR040182 GO:0000045
Tpr3g0847 568 Gene3D HORMA domain 4 248 IPR036570 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0847 Tpr-Chr3 7981621 7986225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0847 K08331 - gmx:100816476 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0847 3 7981621 7986225 Tpr3g0847 3 7981621 7986225 ECH