Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0843 ATGGACTCAGATCTCAAATCGGCCAAATCCGCTTACCAGAACGCCAAAGCAGAAGGTAACCACCGTGAAGAAGCTCGTTGGGCAAACGTCATCGGCGATATACTCAAGAACAGAGGAGAATACGTTAAAGCCCTCAAATGGATCAAAATCGATTACGATGTTTCTCGGAAACACTTACCAGAGAAACACTTACTCACAACTTGTCAATCCCTCGGTGAAATCTATCTCCGTCTTGAGCGTTTTGACGATGCCCTAACATTCCAGAAAAAACATTTAGATCTTGCTAGGGACGCTGATGATCTTGTTGAGGAACAACGAGCTAGCACGCAGTTAGGTCGAACTTACCACGAATTGTTTTCGAAATCAGAACATGATCACAATTCAATTCGCAATGCGAAGAAGTATTTCAAGTCTGCAATGGATTTGGCAGTTAGTCTTAAAGAGAATCCACCGCCGAATAGTAAGTCTTCGTTTCTCAAGGAATATATTGATGCTTATAACAATATAGGAATGCTTGAAATGGAGATTGATAACTTGCACGAGGCGGAGAAGATACTTACTAGAGGATTGGAGATTTGTGATGAAGAGGAGATTAGTGAGTATGATGACGGGCGTAGTAGGTTACATCATAATCTTGGGAATGTGTATATGGAATTGAGGATGTGGAATGAAGCTAGGAAGAATATTAAGAAGGATATTGTGATTTGTCATAAAATTGGACATTGCCAAGGAGAAGCGAAAGGGTATATTAATCTTGGTGAAATGCATTACCGGACTCAGAAGTATGACGAGGCACGGTCTTTTTATCAGAAGGCGCTTGCTTTGGCGAAGTCTTTGGAGGATGAGGATGCTTTGGTCAGACAGATTAATCAGAATATTAAAATTGTTAAATCAGCTGTTGAAGTTATGGACGAAATCAAGACAGAAGAGCAGAAACTTAAAAAACTCAAAAGAGAAATAGTTTCGGCCAGAGGGACACCGAACGAGCATAAGTGTCTGCTGCTGTTAAACGTGTCTCTTGAAATCCTTGTTGAGAAAGCAAGGACAATCTCTGCTTGGGAGAAGCTTCGTGAATTTGCAAAGGAGAAGAAGAAAGTAGCGAAGGACCTTTGTGACAAGCAAAGGTTGGGTGATTCATATCTGGATGTTGCAGAATCATACCAGAAGCTCAGAAAATTCAACAAGTCAATCAAATGGTACAAAAAGAGTTGGGAAATGTACAAAACAATTGGTAACTTAGAGGGGCAAGCACTGGTGAAACTTAATATTGGTAATGTTTTGGATTCTACTCACAATTGGAGAGAAGCATATGATGCATTTGAAGAGAGCTACAGTATTGCTCGTGACACAGGCCTTCCTAATGTACAGCTTCTTGCCTTGGAAAATATGCATTATAGCAACATGATTAGATTTGATGATGAGGATGAGACCAGGAGGTTGAAACTTCTAATTGATAAGCTTAAGTCAAGTGAAAAGCAAGAGGCTGATAGTACGCCAGGGGATTGTTGCTCTGAGACTGATACTGAAGCAGATGTTTGTATGTCAAATAGTGAGTCAGATGATTTTTGCTTTCCAAAGACAACTTATAGATCAGAAACCCCGACTCCTGAAGAACGGAATGATGATAATGCGCCTCTTATGTCGCTATATCAGTCCATTAAAGACTCGTCTAGAAGGATAACAGGACACAAGGAAAGTCATACCAACTCTACAAAGCAGGTTGAGCAATCACCCAGAAGTCTGACAAAACTAACAAGCGAGAACCAAGCAGTTGTTGGTCGTAAACGTGTCCGTATGATTCTTTCCGACGACGACGATGATGATGAGATGGAATGCTCAAGCAGAAAGGATCACGACTGCCCGTTAGAGAACTTGCCTAATGATGAAGCGGTTAAGAGTAAAATCAGTCCTAGTAAAATTCAGGTTGTCCCAGAGTATGGATCTAAATGTGCAATTAATGTTGAAGAAAGTAGCAGTTCTTTCAAATGCTGGAGTCCAAATACTGCCACTAAAACTTCCAGACGTTCCAGGTCATTGAGCAATGATATAGTTGTTGAACCCGACTTTCCTAGTGGTTCTAAATGTGATACAGATGTCTCTGGCAAACAAAATGTTGTTACCCATCCCATGACAAAGCATTCCCAAGATGATCAATATATTACATGTCGGATTCAGAATGAAATAGTTTATGTAGAAGCAGCCTTGTGCTCTTCTGATGATCAGGTTGACATTGACTCGTTAAAGGCTGTAATTGCATGCCTATACTATCAAAAATTTCCGACAGAAAAGAAATCAGAGGGTTTGTTGCCCATTATTCAGCACATAAAATGTGCTGGAAGAGATCTAGAATCGCTGGCAACTGTTGAAAATCTTAAGGAGCATCTGCGAAATAACATGGTTGAAGCTTTCATTGATGGATGGATTCAGAAGCGCCTAATAAAAACGTACGTGGACTGCTGCAAGGAGTTGTCCGAGGTACCAAAGATCAAGGTGCTGAAGAAACTTTACAATTTAGAGGTTTCTGATGATGAAATCATTGCATCGGACTGTGACCTGCAAGATTTGTCTATAACACCATTGATAGATGCACTGCATTCCCAAATGGCATTTTCAATGCTTGACATCTCTCACAATTGTTTAGGAAATGGAACAATGGAGAAACTTCGAAAGGTGTTCACAGCATCAGGTCAATCTTACGGCGGCTTAACTCTGGATTTGCATTGCAATCGATTTGGCCCAACAACTTTGTTTCAGATTTGTGAATGCTCTGTGCTATTTGCTCGACTCGAAGTGCTTAACATTTCTGGAAACCGTCTTACCGATGCATGTGGATCTTATCTTTCAACAATCTTAAAAAACTGTACAGCTCTTTGTAGCTTGAATGTAGAAAACTGTAGTATCACAACCAGAACCATTCAAAAAATTGCTGATGCATTGGACTCTAGATCTGTACTTTCACACCTTTGCATAGGACACAACAGCCCTGTATCTGGGAATGCTTTAGTTAATCTTCTATCGAAGCTTTCTACTTTAAAAAGGTTTTCCGAGTTGAATATGAGTGGTCTAAAACTAGGCAAACCGGTTGTCGATAGCCTTTTCCAGCTTGCAGGGACCTTGACTTTATCAGGACTAATACTTGGAGGCACTGGTATTGGAAATGAAGGGGCCATAAAAGTAACAGAACCATTGCTCAAAGGGACCGAGGAGCTTGTGAAATTTGACCTATCATATTGTGGGCTAACATCTAACTATATTTTAAGCATCAATGTTAATTCTTTTTGTTCCATCACTGACCTGAGCCTGGAAGGAAATCCTATAATGCTTGAGGGCAGCAATACTCTATTTTTGCTTCTCATAAACCCACAATGCTGTCTCAAAGTTTTGATACTTAGGAAGTGTCAACTTGGGCTTGCTGGAGTTCTTCACATAATTGAGGCTCTTGCAGATAACAGCAGCCTGGAGGAGCTTAACCTTGCTGATAATTCTGTTCCGACTGAACTTTCTGCTCTACAATGTGATTTACCATCTAAAAGCTGCTCACAGAACCAGGAAGATAAACTTGATACTATGAAAGTGGATGATAATCAAGAGGCCTTTTGCGCTCTAAATACTTTGGACGAACAGCTGGAAGTTGCTGATAGTGAAGATATTCCAGTTGGAGCAGAAGCTGCTGCTTCTGGAATTGACGACAGCTGTGCCAGTTCATGTCAAAGAAATTCATCTCCCGAGTGCCATTTAACTCAGCAATTTTCAACTGCTATTGCAAAGGCAAAGAACTTGCAGTTACTAGACCTTAGCAATAATAGTTTTTCTGCACAAGCTGCAGAAACATTCTATGGTTCGTGGACAACTTTACGACCCCTTTCAAGTCACAGACACATCACTAAGAACATTATTCATTTCTCAACGAAGGAAAAGAAATGCTGCAGCGTGAAACCTTGCTGTAAGAAAGTTTGA 3957 0.4051 MDSDLKSAKSAYQNAKAEGNHREEARWANVIGDILKNRGEYVKALKWIKIDYDVSRKHLPEKHLLTTCQSLGEIYLRLERFDDALTFQKKHLDLARDADDLVEEQRASTQLGRTYHELFSKSEHDHNSIRNAKKYFKSAMDLAVSLKENPPPNSKSSFLKEYIDAYNNIGMLEMEIDNLHEAEKILTRGLEICDEEEISEYDDGRSRLHHNLGNVYMELRMWNEARKNIKKDIVICHKIGHCQGEAKGYINLGEMHYRTQKYDEARSFYQKALALAKSLEDEDALVRQINQNIKIVKSAVEVMDEIKTEEQKLKKLKREIVSARGTPNEHKCLLLLNVSLEILVEKARTISAWEKLREFAKEKKKVAKDLCDKQRLGDSYLDVAESYQKLRKFNKSIKWYKKSWEMYKTIGNLEGQALVKLNIGNVLDSTHNWREAYDAFEESYSIARDTGLPNVQLLALENMHYSNMIRFDDEDETRRLKLLIDKLKSSEKQEADSTPGDCCSETDTEADVCMSNSESDDFCFPKTTYRSETPTPEERNDDNAPLMSLYQSIKDSSRRITGHKESHTNSTKQVEQSPRSLTKLTSENQAVVGRKRVRMILSDDDDDDEMECSSRKDHDCPLENLPNDEAVKSKISPSKIQVVPEYGSKCAINVEESSSSFKCWSPNTATKTSRRSRSLSNDIVVEPDFPSGSKCDTDVSGKQNVVTHPMTKHSQDDQYITCRIQNEIVYVEAALCSSDDQVDIDSLKAVIACLYYQKFPTEKKSEGLLPIIQHIKCAGRDLESLATVENLKEHLRNNMVEAFIDGWIQKRLIKTYVDCCKELSEVPKIKVLKKLYNLEVSDDEIIASDCDLQDLSITPLIDALHSQMAFSMLDISHNCLGNGTMEKLRKVFTASGQSYGGLTLDLHCNRFGPTTLFQICECSVLFARLEVLNISGNRLTDACGSYLSTILKNCTALCSLNVENCSITTRTIQKIADALDSRSVLSHLCIGHNSPVSGNALVNLLSKLSTLKRFSELNMSGLKLGKPVVDSLFQLAGTLTLSGLILGGTGIGNEGAIKVTEPLLKGTEELVKFDLSYCGLTSNYILSINVNSFCSITDLSLEGNPIMLEGSNTLFLLLINPQCCLKVLILRKCQLGLAGVLHIIEALADNSSLEELNLADNSVPTELSALQCDLPSKSCSQNQEDKLDTMKVDDNQEAFCALNTLDEQLEVADSEDIPVGAEAAASGIDDSCASSCQRNSSPECHLTQQFSTAIAKAKNLQLLDLSNNSFSAQAAETFYGSWTTLRPLSSHRHITKNIIHFSTKEKKCCSVKPCCKKV* 1319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0843 1318 PANTHER PROTEIN TONSOKU 2 1317 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Tpr3g0843 1318 SUPERFAMILY RNI-like 836 1286 - -
Tpr3g0843 1318 MobiDBLite consensus disorder prediction 556 582 - -
Tpr3g0843 1318 Gene3D Ribonuclease Inhibitor 819 1216 IPR032675 -
Tpr3g0843 1318 SUPERFAMILY TPR-like 162 447 IPR011990 GO:0005515
Tpr3g0843 1318 Gene3D Tetratricopeptide repeat domain 339 468 IPR011990 GO:0005515
Tpr3g0843 1318 Gene3D Tetratricopeptide repeat domain 1 320 IPR011990 GO:0005515
Tpr3g0843 1318 SUPERFAMILY TPR-like 9 148 IPR011990 GO:0005515
Tpr3g0843 1318 Pfam Tetratricopeptide repeat 67 99 IPR019734 GO:0005515
Tpr3g0843 1318 ProSiteProfiles TPR repeat profile. 246 279 IPR019734 GO:0005515
Tpr3g0843 1318 Pfam Tetratricopeptide repeat 206 278 - -
Tpr3g0843 1318 ProSiteProfiles TPR repeat region circular profile. 246 275 - -
Tpr3g0843 1318 SMART tpr_5 246 279 IPR019734 GO:0005515
Tpr3g0843 1318 SMART tpr_5 65 98 IPR019734 GO:0005515
Tpr3g0843 1318 SMART tpr_5 417 450 IPR019734 GO:0005515
Tpr3g0843 1318 SMART tpr_5 206 239 IPR019734 GO:0005515
Tpr3g0843 1318 SMART tpr_5 163 196 IPR019734 GO:0005515
Tpr3g0843 1318 SMART tpr_5 25 58 IPR019734 GO:0005515
Tpr3g0843 1318 SMART tpr_5 377 410 IPR019734 GO:0005515
Tpr3g0843 1318 SMART LRR_RI_2 1038 1065 - -
Tpr3g0843 1318 SMART LRR_RI_2 1093 1120 - -
Tpr3g0843 1318 SMART LRR_RI_2 1122 1149 - -
Tpr3g0843 1318 SMART LRR_RI_2 1150 1176 - -
Tpr3g0843 1318 SMART LRR_RI_2 926 953 - -
Tpr3g0843 1318 SMART LRR_RI_2 867 894 - -
Tpr3g0843 1318 SMART LRR_RI_2 954 981 - -
Tpr3g0843 1318 Coils Coil 299 326 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0843 - - gmx:100805682 2025.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0843 3 7957414 7967844 Tpr3g0843 3 7957414 7967844 ECH