Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0828 ATGTTATCAAATATATTTGCAGAGCTATGTATAGCTCCAAACAAAATCAAGGCCAATAAGAAGGTCAATAATGTTTCATCTGATGAAACATATCTTGATCTTTGCAATTTCTCAGAGTCTTTGAAGTCCTTTAAAGTGTTATTCGAGACAACACTTCCATGTAATGAATCTGTGGAAGAAAAACTATGTTGGATTCGGTCAGAAATCATAGGCAACGATGTAGAATTCAACTCTCCATTTGGTAAACGAAAACTTGTCTATGCTGATCACACAGCTTCTGGTCGCAGTCTTCATTTCATTGAAAACTTCATCGCCAAACATCTTCTTCCTTTCTACGGAAATACCCATACTTGTGAGAGTTATGTTGGAAACAAGACAACAAAAATGGTACATGAAGCAACCGAATATATTAAGAAATGTTTAGGTGGCGGGGAAGATGACGCCCTTATGTTATGTGGCTCGGGCGCAACCTCAGCCATCAAGAGACTTCAAGAAGTTATGGGAATCGTCGTGCCTTCTATTTTGAGGGAAAGAATGTTGAAGTGTCTTGACGAAGAAGAAAGATGGGTGGTTTTTGTCGGACCTTATGAGCATCATTCAAATTTACTTTCTTGGAGGCAGAGTTTGGCTGAGGTTGTAGAGATTGGTCTAGATGATAAAGGGCTGCTCGACATGGAAGCTCTAAAGCTACGGCTTGAAGCCTATAAAGATACGAATCGACCCTTGTTGGGATCTTTCTCAGCTTGTAGTAATGTCACTGGAATTTACACAGATACACGAGCAATTGCTAAGCTTCTTCATCAATACAATGGATTTGCATGCTTTGATTTTGCAGCAAGTGGTCCATATGTGGAGATTGATATGAGGTCAGGGCAGATTGATGGGTATGATGCTGTGTTCATCAGCCCACATAAGTTTCTTGGTGGACCTAGCTCTCCAGGAGTGCTATTAATGAACAAAGCCTTGTATAGGTTGGGATCTTCACCTCCATCTACTTGTGGAGGTGGAACTGTTAATTATGTCAATGGCTTCGACGAAAAGGATACATTATACATGGAGGACATAGAGGAAAGAGAAAATGGGGGCACACCTCCAATAATCCAAACAATGAGAGCAGCATTGGCATTTTGGGTGAAAGAATACATCAACTATGAAGAGATTGAAAAAAGGGAACAACTCTACATTAACAAAGCACTTAAGAGACTCATGCCTAATCCAAACATTGAGATTTTAGGGAACATAAGCACCAAAAGACAAGCTATTTTATCATTTGTGATCTATTCTACCACCAATATAACTAAGATACTTAGTGGCTCTTTTGTTGCAACATTGTTAAATGATCTATTTGGCATTCAAGCTAGAGGTGGATGTGCTTGTGCTGGACCTTATGGCCATGATTTGCTTAATATCAATGAATCTCAATCTCTAGCCGTTAGATCGGCAATTCAAAAGGGTTACATTGGTGTGAAACCCGGATGGACGAGAGTTAGTTTTCCTTATTACATGGGTGAAGAGGACTTCGAGTTCATTTTAGCTGCCATAGAGTTTGTAGCAACCTATGGCCAACGATTCCTTTCACTATACAAATTTGATTTGAAAAATGGAAGCTGGAAAATTAAGAAACAAAAACTTGAGATTCTACTCAATGAAAATAAATTTTACATGAGAGAAACTAGAGAGAAAGCAAACAATAATTATTTCAAAGCAAGAAGTGATTGTAATGTTGGAACCAAACAAGTTGGGATATTGAGAAGAAAATCATTATTAGAAGCTAAATGTATTGCTAATCGCCTCCCTAAATTCCTTTCTGAAAGGATCCATCCAGATGTAGATCCTAGTGTCCTCCATTTTATAGTTTAG 1860 0.3844 MLSNIFAELCIAPNKIKANKKVNNVSSDETYLDLCNFSESLKSFKVLFETTLPCNESVEEKLCWIRSEIIGNDVEFNSPFGKRKLVYADHTASGRSLHFIENFIAKHLLPFYGNTHTCESYVGNKTTKMVHEATEYIKKCLGGGEDDALMLCGSGATSAIKRLQEVMGIVVPSILRERMLKCLDEEERWVVFVGPYEHHSNLLSWRQSLAEVVEIGLDDKGLLDMEALKLRLEAYKDTNRPLLGSFSACSNVTGIYTDTRAIAKLLHQYNGFACFDFAASGPYVEIDMRSGQIDGYDAVFISPHKFLGGPSSPGVLLMNKALYRLGSSPPSTCGGGTVNYVNGFDEKDTLYMEDIEERENGGTPPIIQTMRAALAFWVKEYINYEEIEKREQLYINKALKRLMPNPNIEILGNISTKRQAILSFVIYSTTNITKILSGSFVATLLNDLFGIQARGGCACAGPYGHDLLNINESQSLAVRSAIQKGYIGVKPGWTRVSFPYYMGEEDFEFILAAIEFVATYGQRFLSLYKFDLKNGSWKIKKQKLEILLNENKFYMRETREKANNNYFKARSDCNVGTKQVGILRRKSLLEAKCIANRLPKFLSERIHPDVDPSVLHFIV* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0828 619 Pfam Aminotransferase class-V 86 507 IPR000192 -
Tpr3g0828 619 PANTHER - 24 431 - -
Tpr3g0828 619 PANTHER - 434 617 - -
Tpr3g0828 619 Gene3D - 103 331 IPR015421 GO:0003824
Tpr3g0828 619 PANTHER CYSTEINE DESULFURASE 434 617 - -
Tpr3g0828 619 PANTHER CYSTEINE DESULFURASE 24 431 - -
Tpr3g0828 619 Gene3D Aspartate Aminotransferase, domain 1 362 522 IPR015422 GO:0003824
Tpr3g0828 619 SUPERFAMILY PLP-dependent transferases 79 515 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0828 Tpr-Chr3 7822299 7827891 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0828 - - gmx:100776921 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0828 3 7822299 7827891 Tpr3g0828 3 7822299 7827891 ECH