Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0823 ATGCCGACTCAAAATGTAGATTCTCCGAAAGCGCAGATGAGGAGAGCACCGTCGAGAAGCGCGGCGGTGACGACGGTCTCTATGGAAGTATTCGACAACGAAGTCGTTCCTGCCTCACTCGCTTCCATCTCACCTATTCTCAGAGTCGCTAACGAGATTGAATCAGAGCGTCCTAGAGTTGCATACCTATGTAGGTTTTACGCATTCCAGAAAGCACACAGGTTGGATCAGAGTTCCACCGGTCGTGGTGTTAGGCAGTTTAAGACGTTGTTACTGCAACGATTGGAGAGGGACAATGCAACAAGTCTTGCCACTCGGATTAAGAAAACAGATGCAAGGGAAATCCAGGCTTATTATGAACAATACTATCAACAATATGTCAGAGCTCTTGACCAAGCGGATCAGGCAGACAGGACTCAGCTCAGTAAAGCTTACCAGACTGCTGGGGTGCTCTTTGAAGTGCTTTGTGCCGTTAATAAGACCGAGAAGGTTGAAGAAGTAGCTCCCGAGATTATCGCCGCTGCTAGAGATGTCCAGGAAAAGACGGAGATTTATACGCCGTATAATATTCTTCCTCTAGACTCTGCTGGTGCTTCTCTGCCCATTATGCAGTTTGAAGAGATTAAGGCTGCTGTTTCTGCGCTGTGGAACACTCGTGGCTTGAACTGGCCTGTCTCATTTGAGCAACAGATCCATAGATCTGGAGATTTAGACATTCTTGATTGGCTTAGAGCAATGTTTGGTTTCCAGAAGGACAGCGTGAGGAATCAAAGGGAGCATTTGATTCTGCTTCTTGCTAACTCTCATATAAGGCTAAACCCTAAACCCGAGCCTTTTAACAAGCTCGATGATCGTGCTGTTGATTCTCTGATGAAAGATCTCTTTAAGAATTACAAAACATGGTGCAAATTTTTGGGACGAAAGCACAGTTTACGACTGCCTCAAAGTCAACCGGACATACAGCAGAGGAAGTTGCTTTATATGAGTCTGTATCTTCTCATTTGGGGTGAAGCGTCCAATGTTCGCTTCATGCCAGAGTGTCTATGCTACATATTTCACAATATGGCATATGAACTGCATGGTTTATTGGCTGGAAACGTCAGCATTGTCACTGGTGAAAATATCAAGCCTTCTTATGGTGGAGATGACGAGGCATTCCTACGAAAGGTTATCACACCCCTATATCAAGTAATTGAAAAGGAAGCTAAGAAGAGCAGAAATGGAAAGGCTGCACACTCAGCATGGTGCAACTATGATGATCTAAATGAGTATTTCTGGTCACTTGATTGCTTCTCTCTTGGATGGCCCATGCGTGATGATGGCGATTTTTTTAAATCCACAAGTGATTTGACACAGGGAAGAAAGGGTGCGCCAAGAAAATCCGGAAAAATTGGAAAATCAAATTTTGTTGAAACACGGACGTTTTGGCACATCTTCCGCAGTTTTGATCGTCTCTGGACCTTTTTTTTACTGGGTTTGCAGGTGATGTTCATTATTGCATGGGATGGGATTTCACTGATGGAAATCTTTCAGAAGGATGTTTTATATAAACTGTCTAGTATATTCATCACAGCATCCATTCTGCGCTTGCTTCAAAGCATCTTGGATCTGGTCCTGAACTTCCCAGGCTATCATCGATGGAAATTCTTCGATGTGCTAAGAAATATTCTTAAAGTCATTGTCAGCTTTATATGGGTTATCATTCTTCCACTCTTCTATGTACATTCTTTCAAGGGTGCACCTCAGGGTCTCAAGGAGTTGCTTTCTTTTTTCAAACAAATAAATGACATTCCAGCACTGTACATGCTGGCAGTTGCATTGTACATGTTACCAAACTTATTAGCAGCTGCACTCTTTCTTTTCCCAATGCTAAGGCGCTGGATTGAAAATTCAGACTGGCACATAGTTAGATTCTTCTTATGGTGGTCTCAGCCAAGAATATATGTTGGAAGAGGAATGCATGAAAGTCAATTTGCTCTCCTAAAGTATACTATTTTCTGGGTGTTGCTATTGGCTTCAAAATTTTTATTCAGCTTTTATGTCCAGATAAAACCTCTAGTTAAGCCAACCAAGGACATAATGAGCATTCAACATGTTGAGTATGCTTGGCATGAGTTTTTCCCCAATGCTCAAAACAACTATTGTGCAGTTGGTGCACTGTGGGCTCCTGTACTTATGGTTTATTTCATGGACACTCAAATTTGGTATGCGATCTTCTCAACTATGTATGGCGGCATTGTTGGAGCCTTTGATCGCCTAGGAGAGATACGCACTCTGGGCATGCTAAGATCACGGTTTCAGTCAATGCCTGGTGTATTCAACACATGCTTGGTTCCTTCTAATAAGAAAAAAGGAAGATTCTCCTTCTCAAAGCAATTCTCTGAGAGTTCTGCAAGCAGAAGGAGTGAAGCTGCCAAATTTGCCCAATTATGGAATGAAATTATTTGCAGTTTTCGTGAGGAAGATCTCATAAGTGACAGGGAGATGGATCTTTTGCTGGTTCCTTACACATTGGGTCCTGATCTCAAAATAATTCAGTGGCCACCATTTTTGCTTGCAAGCAAGATTCCTGTAGCATTGGATATGGCAACTCAATTTCGAGGGAGGGACTCTGATCTGTGGAGGCGCATCTGTGCAGATGAATATATGAAATGTGCTGTGATTGAATGCTATGAATCTTTTAAACAAATTCTACATGATTTAGTGATTGGAGAAACTGAAAAAAGGATAATTTCCATCATTGTTAAAGAAGTCGAGAGGAACATGTCAAAGAATATACTTACTATAAATTTCCGGATGGGCTTCTTACCCTCCCTTTGCAAGAAGTTTGTGGAGCTTGTAGAACTTTTAAAAGATGCAGATCCATCGAAGAGGGGTACAGTGGTGGTCTTGCTGCAAGACATGTTAGAAGTTGTTATTGATATGATGGTGAATGAAATCAGTGAATTGGCAGAACTTAATCAAATTAGTAAGGATACTGGAGAGCAAGTTTTTGCTGGTACTGAGGCAATGCCTGCTATAGCATTTCCTCCTGTGGTTACAGCACAATGGGAGGAACAGTTAAGACGTCTTTACCTACTCTTGACGGTGAAGGAATCAGCTATTGAGGTTCCAACAAATAGTGAAGTACGCAGAAGGATTGCATTCTTTACAAATTCATTGTTCATGGATATGCCACGTGCTCCCCGTGTCCGTAAAATGCTCTCATTCAGTGTCTTAACTCCATACTACAGTGAAGAGACTGTGTATTCTAAGAATGACATTGAGGTTGAAAATGAGGACGGTGTGTCAATCATATATTATTTGCAAAAGATTTTCCCTGATGAATGGAATAACTTCATGGAGCGACTTGATTGTAAGAAAGATAGCGAAATATGGGAAAAAGATGAGAATATATTACAACTACGTCACTGGGCCTCATTAAGAGGACAAACACTTTGCAGGACAGTTAGGGGAATGATGTACTACCGGAGGGCGTTAAAGCTCCAGGCATTTCTTGACATGGCTAGTGAAAAAGATATCCTCAATGGATACAAAGCTATTACACTTCCATCCGAGAAAGATAAAGAGAGTCAGAGCCTATATGCAAATTTAGAGGCTATGGCTGACATGAAATTCACGTATGTTGCTACCTGTCAAAACTATGGGAATCAGAAGCGTAGCGGAGACCGGCGTGCAACAGATATCTTGAATTTGATGGTTAACAATCCCTCACTCCGTGTTGCATATATTGACGAAGTTGAAGAAAGAGAAAGTGGAAATGTGCAGAAAGTTTATTATTCTGTATTGATCAAAGCGGTGGACAATCGTGACCAAGAAATATTTCGAATAAAACTTCCGGGTCCAGCAAAGTTAGGAGAAGGGAAGCCTGAAAACCAGAATCATGCCCTTATTTTTACTAGAGGGGAAGCCCTTCAGACAATCGACATGAACCAGGACAATTACTTGGAAGAAGCTTTAAAAATGCGTAACCTTCTGGAAGAATTTAATGAGGATCATGGAATGCGCCCGCCTACCATATTAGGTGTTCGTGAGCATATCTTTACTGGCGGTGTCTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCATTAAAGGTTCGATTCCACTATGGTCATCCGGATGTATTTGATAGAATTTTCCATTTAACCCGCGGAGGAATCAGCAAGGCTTCTTGTGGCATCAATCTGAGCGAGGATATATTTGCTGGATTCAACTCAACACTAAGACGTGGGAATATTACTCATCATGAATATATCCAAGTTGGAAAGGGTAGGGATGTCGGGCTCAATCAAATCTCTCTTTTTGAAGCAAAAGTGGCCTGTGGTAATGGAGAGCAAACACTAAGCAGGGATATCTACCGGTTGGGGCATCGATTTGACTTTTTCCGCATGCTATCGTTTTATTTTACAACCGTTGGATTTTATATCAGCTCAATGGCAGTGGTCATCACGGTCTATGCTTTCTTATATGGCAAACTTTACCTGTCATTGAGTGGAGTTGAGGCTGCTATAGTTAAATTTGCTAGAAGGAAAGGAGATGACCCTTTGAAGGCAGCAATGGCTTCTCAAGCCCTTGTGCAAATAGGTCTTCTAATGACTCTGCCGATGATAATGGAAATTGGACTCGAGAGAGGGTTCAGAACTGCTGTAGGTGATCTCATAATAATGCAACTGCAGCTTGCACCCGTTTTCTTCACTTTCTCACTAGGGACGAAGATGCACTATTTTGGGCGCACTCTTCTACATGGAGGGGCAAAGTATAGAGCAACTGGGCGTGGTTTTGTAGTTCGTCATGAGAAGTTTGCAGATAATTACAGGATGTATTCCAGGAGTCACTTTGTAAAGGGGATAGAGTTAGCTTTACTGCTTATATCTTATATGCTTTATGGATCAGCAACTCCTGATACAACAGCATATGCACTTCTCTCAAGCTCAATGTGGTTTTTGGTGTGTTCTTGGTTGTTTAGTCCTTTCCTGTTTAATCCATCAGGATTTGAGTGGCAGAAGATATATGAGGATTGGGAAGATTGGTCAAAATGGATAAGTAGTCGAGGTGGTATTGGTGTTCCTTCAACCAAGAGCTGGGAATCATGGTGGAATGAAGAACAGGAACATCTACAGCACACTGGAATGTGGGGGCTTATTTGGGAGATAGTACTTGATCTTCGTTTCTTCGTATACCAGTATGGGATTGTGTATCATCTTCATGTAGCCAGAGGTGACAAGAGCATCATGGTTTATGGTCTGTCCTGGCTAGTCATAGTAGCTGTGATGATCATCTTGAAGGTAGTGTCCATGGGTAGAAAGACTTTCAGTGCTGATTTTCAACTTATGTTTCGTCTCCTCAAATTGTCTCTGTTTATTGGAGCAGTTATCATTCTAGTCTTGATGTTTACTCTATTTAGTTTTACATTTGGAGACATCTTTGCGAGTCTTCTAGCATTTTTTCCAACAGGGTGGGCACTTATACAGATAGCACAAGCATGTAGGCCGTTTGTAAAGGCAATTGGAATGTGGGGGTCTGTCAAAGCTTTATCAAGAGGGTATGAATACATTATGGGGGTGATTGTCTTTACACCAGTGGCCATATTAGCTTGGTTCCCATTTGTTTCGGAATTCCAAACTAGACTGCTATACAACCAAGCATTCAGCAGAGGGCTTCAAATCCAAAGAATTCTTGCTGGTGGCAAGAAGAATAAATAA 5745 0.4174 MPTQNVDSPKAQMRRAPSRSAAVTTVSMEVFDNEVVPASLASISPILRVANEIESERPRVAYLCRFYAFQKAHRLDQSSTGRGVRQFKTLLLQRLERDNATSLATRIKKTDAREIQAYYEQYYQQYVRALDQADQADRTQLSKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYTPYNILPLDSAGASLPIMQFEEIKAAVSALWNTRGLNWPVSFEQQIHRSGDLDILDWLRAMFGFQKDSVRNQREHLILLLANSHIRLNPKPEPFNKLDDRAVDSLMKDLFKNYKTWCKFLGRKHSLRLPQSQPDIQQRKLLYMSLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPLYQVIEKEAKKSRNGKAAHSAWCNYDDLNEYFWSLDCFSLGWPMRDDGDFFKSTSDLTQGRKGAPRKSGKIGKSNFVETRTFWHIFRSFDRLWTFFLLGLQVMFIIAWDGISLMEIFQKDVLYKLSSIFITASILRLLQSILDLVLNFPGYHRWKFFDVLRNILKVIVSFIWVIILPLFYVHSFKGAPQGLKELLSFFKQINDIPALYMLAVALYMLPNLLAAALFLFPMLRRWIENSDWHIVRFFLWWSQPRIYVGRGMHESQFALLKYTIFWVLLLASKFLFSFYVQIKPLVKPTKDIMSIQHVEYAWHEFFPNAQNNYCAVGALWAPVLMVYFMDTQIWYAIFSTMYGGIVGAFDRLGEIRTLGMLRSRFQSMPGVFNTCLVPSNKKKGRFSFSKQFSESSASRRSEAAKFAQLWNEIICSFREEDLISDREMDLLLVPYTLGPDLKIIQWPPFLLASKIPVALDMATQFRGRDSDLWRRICADEYMKCAVIECYESFKQILHDLVIGETEKRIISIIVKEVERNMSKNILTINFRMGFLPSLCKKFVELVELLKDADPSKRGTVVVLLQDMLEVVIDMMVNEISELAELNQISKDTGEQVFAGTEAMPAIAFPPVVTAQWEEQLRRLYLLLTVKESAIEVPTNSEVRRRIAFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDIEVENEDGVSIIYYLQKIFPDEWNNFMERLDCKKDSEIWEKDENILQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMASEKDILNGYKAITLPSEKDKESQSLYANLEAMADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEERESGNVQKVYYSVLIKAVDNRDQEIFRIKLPGPAKLGEGKPENQNHALIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGMRPPTILGVREHIFTGGVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHLTRGGISKASCGINLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSFYFTTVGFYISSMAVVITVYAFLYGKLYLSLSGVEAAIVKFARRKGDDPLKAAMASQALVQIGLLMTLPMIMEIGLERGFRTAVGDLIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHEKFADNYRMYSRSHFVKGIELALLLISYMLYGSATPDTTAYALLSSSMWFLVCSWLFSPFLFNPSGFEWQKIYEDWEDWSKWISSRGGIGVPSTKSWESWWNEEQEHLQHTGMWGLIWEIVLDLRFFVYQYGIVYHLHVARGDKSIMVYGLSWLVIVAVMIILKVVSMGRKTFSADFQLMFRLLKLSLFIGAVIILVLMFTLFSFTFGDIFASLLAFFPTGWALIQIAQACRPFVKAIGMWGSVKALSRGYEYIMGVIVFTPVAILAWFPFVSEFQTRLLYNQAFSRGLQIQRILAGGKKNK* 1915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0823 1914 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 12 1913 - -
Tpr3g0823 1914 Coils Coil 1312 1332 - -
Tpr3g0823 1914 Pfam 1,3-beta-glucan synthase component 1128 1730 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Tpr3g0823 1914 Pfam 1,3-beta-glucan synthase component 1037 1122 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Tpr3g0823 1914 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 324 435 IPR026899 -
Tpr3g0823 1914 Gene3D - 28 183 IPR023175 -
Tpr3g0823 1914 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 12 1913 - -
Tpr3g0823 1914 Pfam Vta1 like 42 169 IPR039431 -
Tpr3g0823 1914 SMART FKS1_dom1_2 322 438 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0823 Tpr-Chr3 7732404 7748423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0823 7 1914 Glycosyltransferase AT1G05570 60.103 0.0 2400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0823 K11000 - gmx:100777985 3410.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0823 3 7732404 7748423 Tpr3g0823 3 7732404 7748423 ECH
Tpr3g3149 3 34710638 34724042 Tpr3g0823 3 7732404 7748423 PCT