Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0802 ATGGCACCATCAATCACTTCTAATGTTTCTCCCTTGAAAAGTGAAAATGAGGATAAAAAAATTATTGACTTCAAATCACTTCACGAGGAAGCAATAGTTCCAAAAGAGTTTATTTGGCCATCTGAGGATTTGGTTGAGGGCAGCAAAGAAGAGTTGAATGTACCTATCATTGATTTAGAAGCCACATTTAATGGTGATGATGTTGCTTTAGCATCTACTGCAGAGATTGTGAGAGAAGCATGCATGAAACATGGCTTTTTCTTAGTCACAAATCATGGAGTTGATGAAAATTTGATAAATGATACTTATCAAGAATTTGTTTCTCTTTTTAAGCTTCCTTTAAGCAGAAAGCTAAGTGCAATGGGGAGTCCATGGGGTTACTCAGGTGCTCATGCATCAAGATTCTCAACAAGCTTGCCATGGAAAGAAATATTTACTTTCCAATATAAACACTATGATGAATCTGAAACACAAATTGTTGATTTCTTCACTTCAATTTTAGGTGATGACCACCAACACGCTGGGTTGGTGTTGCAAAAGTATTGTGAAGCCATGAAGAAATTATCTGGGGTTATTTTGGAGCTATTGGCAATTAGTTTGGGTGTTGATCGAGAACATTACAAGAAGTTTTTCGAAGATGCAGAATCAATGATGAGGTGCAACTCTTACCCACCTTGCAGTGGTCTCAATGTTGGCACCCTTGGCACTGGTCCTCACTGTGACCCAACTTCAGTCACCCTTCTATTCCAAGACCAAGTTGGAGGTCTTGAAGCTTTTGTGGATAATAAATGGCTTGCAATTCGCCCTCAACCTAATACTTATGTCATTAACATAGGTGACACTTTCAAGGCGTTGACTAATGGAATATACAAGAGTTGTCTTCATAGGGTATTGGCTAACAAAGAGATGGACAGAAAGACTTTAGCTTTCTTTTTGTGTCCAAAAAAAGACAAAACTGTAAGAGCACCTGATAATATATTGGGAAGACAAGAGTCAAGGAATTATCCTGATTTCACATGGTCACAACTTTTTGAGTTTACACAAAAGAAGCATAGAGCTGACCCTAACACTCTTCCAGATTTTGTCTCGTGGCTTAATTCCAACCAATCAAACAACTAG 1119 0.3816 MAPSITSNVSPLKSENEDKKIIDFKSLHEEAIVPKEFIWPSEDLVEGSKEELNVPIIDLEATFNGDDVALASTAEIVREACMKHGFFLVTNHGVDENLINDTYQEFVSLFKLPLSRKLSAMGSPWGYSGAHASRFSTSLPWKEIFTFQYKHYDESETQIVDFFTSILGDDHQHAGLVLQKYCEAMKKLSGVILELLAISLGVDREHYKKFFEDAESMMRCNSYPPCSGLNVGTLGTGPHCDPTSVTLLFQDQVGGLEAFVDNKWLAIRPQPNTYVINIGDTFKALTNGIYKSCLHRVLANKEMDRKTLAFFLCPKKDKTVRAPDNILGRQESRNYPDFTWSQLFEFTQKKHRADPNTLPDFVSWLNSNQSNN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0802 372 Pfam 2OG-Fe(II) oxygenase superfamily 215 314 IPR044861 -
Tpr3g0802 372 PRINTS Isopenicillin N synthase signature 77 94 - -
Tpr3g0802 372 PRINTS Isopenicillin N synthase signature 239 260 - -
Tpr3g0802 372 PRINTS Isopenicillin N synthase signature 274 300 - -
Tpr3g0802 372 PANTHER GIBBERELLIN 20 OXIDASE 2 26 367 - -
Tpr3g0802 372 SUPERFAMILY Clavaminate synthase-like 31 353 - -
Tpr3g0802 372 Gene3D - 20 354 IPR027443 -
Tpr3g0802 372 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 153 IPR026992 -
Tpr3g0802 372 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 213 314 IPR005123 -
Tpr3g0802 372 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 26 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0802 Tpr-Chr3 7591394 7593928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0802 33 348 Glycosyltransferase AT5G59530 27.410 2.00e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0802 K05282 - gmx:100816834 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0802 3 7591394 7593928 Tpr3g0802 3 7591394 7593928 ECH