Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0801 ATGGAATCAATCAACACTCCTAGCCTTCCCTTTTGCCCTCCACCAAAGGGTGAAAATAACATCCAATATTTTGACTTCACCTCATTGCAAAAGGAAGGAAAAGTGCCAAAAGAGTTCATTTGGCCTTCTGATCAATGGGTCAAAAGTAGTGGAGAAAATATTGAACTACCTCTTATTGACATAAGAGCCATAAAAAATGATGAGGTTGCAATGGTCAATGCTGCAAAAATTGTGAGAAAGGCATGCATAAAACATGGTGCCTTTGAAGTCACTAATATTGGTGAGGGTGTGGACTTAGATTTCATCAATGTTGTTCTTCAAGAAACTAACAACATTTTCAAGCTTCCATTGAGCAAGAAAATTAGTGCTATAACCAAAGATTGTGGTTTCTCAATTGCACATGCAGAGAGGTATACAACTGTATTGCCATGGAAAGAGACATTTACTTTCATGTACAAACACAACAATAAGAATGTGACACAAGTTGTTGATGTCCTCAATTCTCTCTTAGGTCAAGACTTCCAACAAGTTGGGTTGGTGTATCAAAAGTATTGTGATGCAATGAATGAATTATCTAAGATAATTTTGGAGCTATTGGCCATTAGTTTGGGTGTTGATCGCAAGCATTATCAAAGATTTTTTGAAGATGCTGAGTCAATGATGAGATGCAACTTTTACCCACCTTGTAGTGCTAACCTTAATGGTGCTCTTGGCAATGGCCCTCATTGTGACCCAATCTCTATCACTATTCTCCTTCAGGATCAAGTTGGAGGTCTAGAAATATTTGCAGACAACAAATGGCTTGCTATTCCCCCAAAGCCTAACACCTTTGTCATCAACATAGGTGACACTTTCATGGCACTGACCAATGGATTGTACAAGAGTTGCCTACATAGGGTATTGGTTAGCAATGAGTTGGAGAGGAAGTCCTTGACTTTCTTCTTGAATCCAAGAGGTGATAAAACAGTGACTCCCCCAAATGAGCTTTTGGAGAAAGAAGAGTCAAGAAAATATCCTGATTACAAATGGAATGATCTATATAAGTTTACACAAAAAACTCGAAGGGTTGATGCTAACACACTTGATAGTTTCATTGCTTGGCAACAATCTTCCAAACCGTCGACCAACTTTTAG 1134 0.3845 MESINTPSLPFCPPPKGENNIQYFDFTSLQKEGKVPKEFIWPSDQWVKSSGENIELPLIDIRAIKNDEVAMVNAAKIVRKACIKHGAFEVTNIGEGVDLDFINVVLQETNNIFKLPLSKKISAITKDCGFSIAHAERYTTVLPWKETFTFMYKHNNKNVTQVVDVLNSLLGQDFQQVGLVYQKYCDAMNELSKIILELLAISLGVDRKHYQRFFEDAESMMRCNFYPPCSANLNGALGNGPHCDPISITILLQDQVGGLEIFADNKWLAIPPKPNTFVINIGDTFMALTNGLYKSCLHRVLVSNELERKSLTFFLNPRGDKTVTPPNELLEKEESRKYPDYKWNDLYKFTQKTRRVDANTLDSFIAWQQSSKPSTNF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0801 377 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 26 369 - -
Tpr3g0801 377 Pfam 2OG-Fe(II) oxygenase superfamily 218 317 IPR044861 -
Tpr3g0801 377 Gene3D - 26 349 IPR027443 -
Tpr3g0801 377 PANTHER GIBBERELLIN 20 OXIDASE 2 26 369 - -
Tpr3g0801 377 PRINTS Isopenicillin N synthase signature 78 95 - -
Tpr3g0801 377 PRINTS Isopenicillin N synthase signature 242 263 - -
Tpr3g0801 377 PRINTS Isopenicillin N synthase signature 277 303 - -
Tpr3g0801 377 PRINTS Isopenicillin N synthase signature 337 355 - -
Tpr3g0801 377 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 216 317 IPR005123 -
Tpr3g0801 377 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 157 IPR026992 -
Tpr3g0801 377 SUPERFAMILY Clavaminate synthase-like 29 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0801 Tpr-Chr3 7586716 7589153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0801 34 340 Glycosyltransferase AT5G59530 27.019 2.13e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0801 K05282 - cam:101492568 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0801 3 7586716 7589153 Tpr3g0801 3 7586716 7589153 ECH