Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0717 ATGATGTGCTGGCAAAGATGGAAAACCATGACAATGACTGTGGTTTTGCTTCAACTAAGTTTTTCCATGAAAGTCTTCTGTTACTCTTCTCATGCAGATAGAATTGATAAGCTTCCTGGACAACCTCACATAGGTTTTCAACACTTCTCAGGATATGTTACAGTTGATGAAAAAAAACACAGATATCTCTTTTACTATTTTGTTGAATCAGAAACTCATCCATCTTCAAAGCCTCTAGTCCTTTGGCTCAATGGAGGACCAGGTTGTTCTTCCCTTGGAGTAGGTGCATTCTCTGAAAATGGACCTTTCAGACCCAATGGAGAAGTTCTGATTAAAAATGAGCATAGTTGGAATAGAGAGGCAAACATGTTGTATTTGGAGACACCAGTAGGAGTAGGGTTCTCTTATGCTAAAGGTAGTTTCTCCAATATTAAAGTGAATGATGAAAAGACAGCTAGGGAAAACCTTGTGTTCTTGCTACAATGGTTCAACAAGTTCCCTCAATACAAACACAGAGATTTGTTCTTGACAGGAGAAAGCTATGCAGGACATTACATTCCACAACTAGCAAATCTCATGATTGGAATCAACAAAAAGGAAAAGATATTTAATCTTAAAGGCATAGCATTGGGGAATCCGCTTCTAGAATATGTCACCGACTTCAATTCAAGAGCTGAGTTTTTCTGGTCTCATGGATTGATATCAGATTCAACTTACAAAATGTTCACTGCAGGCTGTAATTATTCGCGGTATGTCAGCGAGTACTATCGAAACTTAATTTCGCCTCTTTGTTCGAAGGTAATGAGCCAAGTTAGCAGAGAAACCAGCAAGTTTGTGGACAAATATGATGTCACCCTTGATGTATGCATTTCCTCAGTACTTTCACAATCCAAAGTTTTTTGTCCACAAAACCATCAAGCAAATGAGAGTATAGATGTATGTGTAGACGACAAAGTTACAAATTACTTAAACAGACGAGATGTACAAAAGGCGCTCCATGCCGAGCTTATTGGAGTTTCAAAGTGGGATGTATGCAACAACATCCTACAGTACAATATGCTCAACCTAGAAGTACCTACACTTCATGTTGTTGGATCGCTTATAAAAGCTGGAGTTAGGGCATTAATTTATAGTGGAGATCAAGATTCAGTAATTCCACTGACCGGTAGCCGCACCTTGGTTCAAAAGCTAGCAAAACAGTTAGCATTGAATACAACAGTCCCTTATAGGGTATGGTTTGAAGGTCATCAGGTTGGTGGATGGACTCAAGTTTATGGAAATATTCTCTCATTTGCTACCATTAGAGGTGCCTCCCATGAAGCTCCTTTCTCACAACCTGAAAGATCACTTGTTTTATTCAAGTCTTTCTTAGAAGACAGGCCTTTACCTGAAATTTTCTGA 1401 0.389 MMCWQRWKTMTMTVVLLQLSFSMKVFCYSSHADRIDKLPGQPHIGFQHFSGYVTVDEKKHRYLFYYFVESETHPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEHSWNREANMLYLETPVGVGFSYAKGSFSNIKVNDEKTARENLVFLLQWFNKFPQYKHRDLFLTGESYAGHYIPQLANLMIGINKKEKIFNLKGIALGNPLLEYVTDFNSRAEFFWSHGLISDSTYKMFTAGCNYSRYVSEYYRNLISPLCSKVMSQVSRETSKFVDKYDVTLDVCISSVLSQSKVFCPQNHQANESIDVCVDDKVTNYLNRRDVQKALHAELIGVSKWDVCNNILQYNMLNLEVPTLHVVGSLIKAGVRALIYSGDQDSVIPLTGSRTLVQKLAKQLALNTTVPYRVWFEGHQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEDRPLPEIF* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0717 466 Gene3D - 361 458 - -
Tpr3g0717 466 SUPERFAMILY alpha/beta-Hydrolases 37 463 IPR029058 -
Tpr3g0717 466 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Tpr3g0717 466 Gene3D - 314 349 - -
Tpr3g0717 466 PANTHER CARBOXYPEPTIDASE 27 464 - -
Tpr3g0717 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 464 IPR001563 GO:0004185|GO:0006508
Tpr3g0717 466 Pfam Serine carboxypeptidase 43 458 IPR001563 GO:0004185|GO:0006508
Tpr3g0717 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Tpr3g0717 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Tpr3g0717 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Tpr3g0717 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Tpr3g0717 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Tpr3g0717 466 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0717 Tpr-Chr3 6892401 6895827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0717 322 462 Calmodulin-binding Proteins AT2G22960 28.369 2.63e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0717 K16297 - gmx:100800002 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0717 3 6892401 6895827 Tpr3g0717 3 6892401 6895827 ECH