Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0693 ATGGTTTTCTTTCATGGAATCTTGGACCTTATAGTTCCCCCTCTATGCCTAATTTTCCTGCTCTGTATTTTACCACCTTATCTATTATTCAAGATTGTTTACTTCTTCATAAGATCAATGTTTAGTGAGAACGTAGCAGGAAAAGTAGTACTCATCACTGGGGCCTCCTCTGGCATAGGCGAGCATCTGGCATATGAGTATGGTAAGAGAGGAGCACGCCTAGCTCTTGTTGCCAGAAGAGAGAATCGACTAAAGGAGGTTGCTACCAAAGCCAAGTCCTTTGGGTCTCCTGAAGTCATCACCATCCCAGCAGATGTTTCATGTGTCCAAGACTGTAAACGTTTTGTTGACTTCACACAATTCAACCATTTTGGACAATTGGATCATTTGGTGAACAATGCAGGAATAGTTCCTCTCAGCTTATTTGAAGACATTACTGATATAACTAATTTTGCACCCGCTATGGACATTAACTTCTGGGGTTCTGCATACGGCACATATTTTTCAATCCCCCGTCTCAAAAAATCCAAAGGCAAGATCATAGCCATAGCTTCCTCAGCTGGATGGTTGCCTGCTCCAAGAATGATGTTCTACAATGCAAGCAAAGCAGCAGTGATTAGCTTGTATGAGAGTCTAAGAACTGAATTGGGAAAGGACGTAGGAATAACTATAGTTACACCAGGGTTGATTGAATCAGAAATGACCCAAGGGAAGTTCCTATCTAAGGAAGGCCAAATGGTTCTTGACCAAGAAATGAGAGATGTTCAAGTTAGTGTGGTGCCCATAAGATCAGTCACAGAAGCTGCCAAAGAAATTGTGAATAGCGCTTGTCGTGGAGACTCTTACTTGACAGAACCAGCATGGATTAGGACTACCTTCTATTGGAAGGTGTTCTGCCCTGAAGTATTGGAGTTTTTAAACCGTTGGCTGCTACTATCAGGGTCTTCAGAGAGGGAAACAATTAGCAAGAAGCTAATTAATCTACCAGGCTTAAAGAAATATGTGTATCCTGAGTCAGTTAGAAATCCCAAAGCTCAAGCCCAACTAACGTCCAATTGTATGTCTTTGAAATCTAGGTCATGCTTTGTAAATATTGAAATAATATCTGATGACACTATTACCCCACCCCAAAAAAACTTGTAA 1143 0.4121 MVFFHGILDLIVPPLCLIFLLCILPPYLLFKIVYFFIRSMFSENVAGKVVLITGASSGIGEHLAYEYGKRGARLALVARRENRLKEVATKAKSFGSPEVITIPADVSCVQDCKRFVDFTQFNHFGQLDHLVNNAGIVPLSLFEDITDITNFAPAMDINFWGSAYGTYFSIPRLKKSKGKIIAIASSAGWLPAPRMMFYNASKAAVISLYESLRTELGKDVGITIVTPGLIESEMTQGKFLSKEGQMVLDQEMRDVQVSVVPIRSVTEAAKEIVNSACRGDSYLTEPAWIRTTFYWKVFCPEVLEFLNRWLLLSGSSERETISKKLINLPGLKKYVYPESVRNPKAQAQLTSNCMSLKSRSCFVNIEIISDDTITPPQKNL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0693 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 309 IPR036291 -
Tpr3g0693 380 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 136 IPR002347 -
Tpr3g0693 380 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 178 186 IPR002347 -
Tpr3g0693 380 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 217 IPR002347 -
Tpr3g0693 380 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Tpr3g0693 380 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Tpr3g0693 380 PRINTS Glucose/ribitol dehydrogenase family signature 172 188 IPR002347 -
Tpr3g0693 380 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Tpr3g0693 380 PRINTS Glucose/ribitol dehydrogenase family signature 218 235 IPR002347 -
Tpr3g0693 380 Pfam short chain dehydrogenase 48 238 IPR002347 -
Tpr3g0693 380 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE 1B-LIKE ISOFORM X1 1 340 - -
Tpr3g0693 380 PANTHER RETINOL DEHYDROGENASE-RELATED 1 340 - -
Tpr3g0693 380 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 185 213 IPR020904 GO:0016491
Tpr3g0693 380 Gene3D - 37 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0693 Tpr-Chr3 6665406 6667034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0693 48 243 Acyl Lipid Metabolism Gene Families AT3G55310 30.734 1.27e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0693 K22418 - gmx:100787835 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0693 3 6665406 6667034 Tpr3g0693 3 6665406 6667034 ECH