Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0692 ATGAGTACAATTAACAACATACTGAATATAGTATTGCCCCCATTGTCACTTGTTCTGCTCCCCATTTACATGCTACCTTATCTTTTCTTCAAATTATTTATTTATGTAAAAAGCTTGTTCTACAAAGAAAATATGGCGGGGAAAGTAGTGCTAATCACTGGTGCAGCCTCAGGACTTGGTGAGCAATTAGCTTATGAGTATGCTAGGCAAGGAGCAAGGTTGTCCCTTGTTGACATAAAAAAGGAGAATCTTGTAGAAGTGGCTGATATGGCAACATCTCTTGGTTCCCCTGATGTTATCATCATTGGTGCAGATGTTTCCAAGGTCCAAGACAGTAAGCAGTTTGTTGATGAAACAATTAACTACTTTGGACAATTTTCTGATGCAGTGAATCATCTAGTAAATAATGCTGGAGTTGGTGGGGACCCAAGATTGATAGAGGATTGTTCTGATGTTACTAAATACACTTCAATTATGGATACAAATTTCTGGGGAGCAATTCATGGCACTCTACAAGCAATCCCACATCTCAAAAACAGCAAAGGCAGGATCATAGTGATTGCTTCGTATACTGGATGGTTCCCACTTCCAAGATTAAGTTTCTATAATGCAAGTAAGGCAGCAGTGATAAGCTTCTTTGAGACTCTAAGACTGGAGCTTGGTTGGTGTATTGGCATAACAATTGTCACGCCTGGTTTTCTCAAAACCAAAATGGCATTGAGGGCTTATGAATATGAGGCTAGTCTGAGAATAATTCCAATGGGGTCAACATTTGAATGTGCCAAAGAGATAGTGAAAAGTGCATGCAGGGGAAATATGTATGTGACAAATCCTTCATGGGTCAAAGTGATGTTTCCTTTTAAGATGTTTTATCCTGAATTGGTAGACTGGGCTCAACAACATGTCTTTGGGCTTTTGCCAAAATCTTCTAAAAATGGAAATCTTCATATATTGAAGAATAATCAAGTGCTTAAGGAAGAATAA 984 0.3841 MSTINNILNIVLPPLSLVLLPIYMLPYLFFKLFIYVKSLFYKENMAGKVVLITGAASGLGEQLAYEYARQGARLSLVDIKKENLVEVADMATSLGSPDVIIIGADVSKVQDSKQFVDETINYFGQFSDAVNHLVNNAGVGGDPRLIEDCSDVTKYTSIMDTNFWGAIHGTLQAIPHLKNSKGRIIVIASYTGWFPLPRLSFYNASKAAVISFFETLRLELGWCIGITIVTPGFLKTKMALRAYEYEASLRIIPMGSTFECAKEIVKSACRGNMYVTNPSWVKVMFPFKMFYPELVDWAQQHVFGLLPKSSKNGNLHILKNNQVLKEE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0692 327 Gene3D - 35 306 - -
Tpr3g0692 327 PANTHER RETINOL DEHYDROGENASE-RELATED 1 304 - -
Tpr3g0692 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 42 302 IPR036291 -
Tpr3g0692 327 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 139 IPR002347 -
Tpr3g0692 327 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 182 190 IPR002347 -
Tpr3g0692 327 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 202 221 IPR002347 -
Tpr3g0692 327 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Tpr3g0692 327 PRINTS Glucose/ribitol dehydrogenase family signature 128 139 IPR002347 -
Tpr3g0692 327 PRINTS Glucose/ribitol dehydrogenase family signature 176 192 IPR002347 -
Tpr3g0692 327 PRINTS Glucose/ribitol dehydrogenase family signature 202 221 IPR002347 -
Tpr3g0692 327 PRINTS Glucose/ribitol dehydrogenase family signature 222 239 IPR002347 -
Tpr3g0692 327 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 1 304 - -
Tpr3g0692 327 Pfam short chain dehydrogenase 48 241 IPR002347 -
Tpr3g0692 327 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 189 217 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0692 Tpr-Chr3 6660342 6663109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0692 49 255 Acyl Lipid Metabolism Gene Families AT1G24360 30.047 1.50e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0692 K22418 - gmx:100808990 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0692 3 6660342 6663109 Tpr3g0692 3 6660342 6663109 ECH