Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0677 ATGACCCCTCTCATAAAAACCTTCTTGTTTTCTCTCGTCACTCTCTCCTTCACCTATACACAAGCAGCAACATTCGACATCACAAACAGATGCGGCTACACCGTATGGGCCGCTGCCGTACCGGGCGGTGGTAAACAATTGACCACGGGTCAAACATGGACCATCAACGTCCCTGCAGGTACCAAAGCTGCTCGTATTTGGGCCCGAACTGGATGCAGTTTCGATGGTTCAGGTCGCGGTCGATGCCAAACTGGTGACTGTGGCGGACTACTTAATTGTCAAGCTTATGGTACACCTCCAAACACACTGGCGGAATATGCTTTAAACCAATACATGAATTTGGACTTTTTTGACATTTCTCTCGTGGATGGATTCAACGTTCCAATGGATTTTAGTCCAACGTCTAATGGTTGTACACGTGGCATACAATGTAAGGCTGATGTTAATGGACAATGTCCTAGTCAGCTTAAAACACAAGGGGGTTGTAACAATCCATGTACGGTTTTTAAAACCGATAATTACTGTTGTAATTCTGGTAATTGTGGGCCCACCGATTATTCAAAATATTTTAAGGGTAAGTGTCCTGATGCTTATAGTTACCCAAAGGATGATGCCACAAGTACATTCACTTGCAATGGTGGAACCAATTACAAGGTTGTCTTTTGCCCATGA 672 0.4435 MTPLIKTFLFSLVTLSFTYTQAATFDITNRCGYTVWAAAVPGGGKQLTTGQTWTINVPAGTKAARIWARTGCSFDGSGRGRCQTGDCGGLLNCQAYGTPPNTLAEYALNQYMNLDFFDISLVDGFNVPMDFSPTSNGCTRGIQCKADVNGQCPSQLKTQGGCNNPCTVFKTDNYCCNSGNCGPTDYSKYFKGKCPDAYSYPKDDATSTFTCNGGTNYKVVFCP* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0677 223 Gene3D Thaumatin 23 223 IPR037176 -
Tpr3g0677 223 CDD TLP-P 25 223 - -
Tpr3g0677 223 Pfam Thaumatin family 29 223 IPR001938 -
Tpr3g0677 223 ProSitePatterns Thaumatin family signature. 78 93 IPR017949 -
Tpr3g0677 223 SUPERFAMILY Osmotin, thaumatin-like protein 22 223 IPR037176 -
Tpr3g0677 223 PANTHER OS03G0233200 PROTEIN 7 223 IPR001938 -
Tpr3g0677 223 PANTHER THAUMATIN-RELATED 7 223 - -
Tpr3g0677 223 PIRSF PR5 1 223 IPR001938 -
Tpr3g0677 223 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Tpr3g0677 223 PRINTS Pathogenesis-related protein signature 43 52 IPR001938 -
Tpr3g0677 223 PRINTS Pathogenesis-related protein signature 65 76 IPR001938 -
Tpr3g0677 223 PRINTS Pathogenesis-related protein signature 78 107 IPR001938 -
Tpr3g0677 223 PRINTS Pathogenesis-related protein signature 115 131 IPR001938 -
Tpr3g0677 223 PRINTS Pathogenesis-related protein signature 213 222 IPR001938 -
Tpr3g0677 223 ProSiteProfiles Thaumatin family profile. 22 223 IPR001938 -
Tpr3g0677 223 SMART tha2 25 223 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0677 Tpr-Chr3 6544017 6549190 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0677 7 223 Receptor kinase-like Gene Family AT5G38280 36.475 1.08e-41 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0677 - - gmx:100301882 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0677 3 6544017 6549190 Tpr3g0677 3 6544017 6549190 ECH
Tpr2g3860 2 41395494 41396628 Tpr3g0677 3 6544017 6549190 PCT