Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0674 ATGGGAAAACCAAAAGGGAAAAAATCTGATGGAACCAAAAAAAAGATTGACAGTGGTACAAAATGCAATTCTAAACAACAGACTGCAGAGAAAGATAATGAACATCCTGAATGGTTGCCTGATGGCTGGAATGTGGAATTCAGAACCCGAAAAAGTGGTCCGGCTAAGGGAACTGGATATAAGTGTTATATTGATCCATCAAATACACACAAATTCTACTCCAAACCCGAAGTATTGCGACATCTTGAAACTACAAAGGACAGCAACTGCTCTTCCAAGAAGACGAAAGGAACTGGAAAGCATCCCCCAAGCAAGGAGGAGGAGGAGGAGGAGGAGAAATGCTCTAGCAAGCATTCTCCAAGCAAGGGGGAGGAGAAGCGCACTAACAGTAACCGACATTCTCCAAGCAAGGAGGAAGACAAATGCATTAACATGCATTCTCCAAGCAAGGGGAAAGAGAAATACATCAACACACAGTCTGTAAGCAAGGACGGAGAGAAATGCACCAACACACACTCTCCAAGCAATGTTACGGGTGAAAAGTCCACTGTGGAGGATCTACCACCTGGATGGATTAAAGAAGTAAAGATTCGGAAGCACAGAAGTGGCATAAAGAAAGATTGGTTTTATATTGATCCAGTGAGTGGATATGTATTCCATTCCAAGAAGGATGTAACGCGTTATCTCGAATCTGGAGATATTAGCAGATGTGCCATGAAACCAAGTAGAAGACAACATCAAGATGAAGACAACTCAACTCCATCACCTGCTGCCAAGAGACAGAAACCAAAGCAGTCTACTACACCCGTGCAAAAGAATTTTGTTGCCGAAGAACTAGTTGAAAGCTTAGAATTGCCGGATGTTAACAACTCAAGGAAAGGGCAAGATGTGAATGTGCCATCTGGAACAATGGTTTCTCCTGATACGTCAGGTGAATCCTTGAAAGTGGGTCGTCGGTTTTCACAGAGACTAGCTGGGGTTGAACCTGTCAAATTGGCTGACAATGTGACAGTGACTAATGATCAGACTCTTCTAGTTCCAAAAAGAAATTTGAGAAAAAGCAGAACCACTTTAGCCGCTGATATGGAAAATAAATCACCTCAGCATTTCAATGGTGTCCCAGAAATTGAGCAACCAAAGGCAACAGACACAGGCAACACACTTTCTGAAGTAGTTTTCAAAGAACAACCACGTCAGCTAGGAAGAGATAAAATAGAAAAAAATAAACCAGAACTTCATACCAACTCAAACAAATCCAGTAAGAAGAAAGAGCCCCGCATTCCTTGTCGGGCGTCAAAACGACTGGCGGGATCTGAACCTGGGCTGATGAACTCCATATCCTGTGAAAAAACTTCCAAAAATAAAAGCAAAAGGTCCAAGGAAGTCATAGCTGAATTGCAGAAAAGGGAGGGTGCGCAAATTACCGAGCTTACAGATCATGCACCATTAAATGGAGAGTCAGGAAATAAAAGAATAAAATCTCCTAAAATCCTACCTGCTGGAGACAATCAACCAGAAAAACTTGAAGTGGATGACGAGAAATCAGAACCTCAGCTGTCCTTTGCATTCCACTACTCTTGGTCTGACCCATGTTTGGATTATGCAATCAATACCCTCACGGGCGTGTTGCCGCCAGTTGAGAATTCTGTTGATAATGGACCCTCTACAGTCCCTGAAACTGATATTAAAAAACCTGCATTTGACACTGTCACCAGAAGAAGCAGGGGCTGTCAAAAAAATTCAGATAATGGACCCGCTACCGTCCATGAAACTGATATTCAAAAAACATTGTTTGACAACCTTACCAGAAGAAGCAAGGACAGTCAAAACAATTTGCTTGACAATGTTATAACAAGCAGGGACAAAAACCCACCGGTGCCATCAAATAAATCCAAGAGAAAGAAAGAGGTCCAAGTCCCTATGCGGTTGTCAAAGCGACTTGCTGGCGTTGAACCGGAGGCAAGTCCTTCTGATAAAGCTCTTGAATATTCCAGTAGAAAACCATGCAAAGAAAAACCCACTGCAAATGTAGTTTTAACTAATGGAACATCTGACCATCTCTATGGTGGTGAAGAAACCAAGCTTTTGAAAACAGAAGTGCCAAGAGAATCATCAAGAAAAAGTAGTAAGCGACTCGCTGGCATTGAACCAGAGGCAAGTCCTTCTGATAAAGCTCTTGAATATTCCAGTAGAAAACCATGCAAAGAAAAGCCCACAGCAAATGTACTTTTAACTAATGGAACATCTGACTATCTCTATGGTGGTGAAGAATCCAAGCTTTTGAAAACACGAGTGCTAAGAGAATCATCAAGAAAAAGTGGTAAGTTATATGATGCCCAAACTGTTCAGAAAGAACCACAATTGCAGAAAGTTGAAGCTAAAAATATTAGTGATGGTAGTTCAAAGTCAGAGCTCACCTTGCCATTTGGTGAATCTTGGTCAGACCCATGCCTAGAATTTGCATTCAAGACTCTCACGGGTGCTTTGCCGGTTGATTCTACTGCAGAGATTTTTAAAGTAATGACTCCTGGTGTTGATAACCCGCCAAATAATGAGTTTTATGGGAGAGTGACAACCAACATGAATGGAAAAACTCATGACAACTCAAATCATTCCCGAAACATGAAAGAGTGTAATATGGATGGCCAGTCTTCAAAGCTACTGCTTGGGCAACCTGAGTTGAGGACTAGCTCCACATCTGGGAAAAATGTGCCTGAATTTACCAATGGAGAATCTCATCATCATGAAGACAACATAATAAGGAATTTGGAACCTGTGTTGAGGACTAGCTCCATATCTGGCAAAGATGTGCCTAATTTTATCACCGGAGAATCTCGTAGTCATGACAGCGATGACATATTTAGGAATTTGTTTGGAGAACCTCTATATGTTGAAGCTGAAAACACAACCCAACTTCTGCATGATTCTAGAACTAATGCATACTCACAAATACATGAAGAGCCATTAAAGAAAATTGACCAGGTTGCTGAGGGCGAATTATGTACATCGGTGCAACCACCACCTTTTCAAACTGAAACGTTAAACCATGACAATACTGGATTACAGTTCTGTGAGTCTTTTATGAATTCTTGGTCAGACCCATGCCTAGAATTTGCATTTAAGACTCTTACAGGTGCGATTCCAGTAGAGGACAATTTAGCAATTCCAGGGGGTATCCAGGAACCTGCTAACTGTCATGATGGAAGGGATGATGTATCAGCGTTGCCAGATTTTGGATCTTCCAATTTTTCACAAAGTGATTTCTCATTTCACTTTGATACAGGAGTGAAGTCCACACCAGGGCAGCAGTCATCAATGAGCTCTTCATTCCCATCTCTAGGCCTGCAAGGTTGTCCCGGAGTTGATCCACAACAACAATATTCCCAGTTCAATAATAATTTTCAAAGAAGGTAA 3414 0.4162 MGKPKGKKSDGTKKKIDSGTKCNSKQQTAEKDNEHPEWLPDGWNVEFRTRKSGPAKGTGYKCYIDPSNTHKFYSKPEVLRHLETTKDSNCSSKKTKGTGKHPPSKEEEEEEEKCSSKHSPSKGEEKRTNSNRHSPSKEEDKCINMHSPSKGKEKYINTQSVSKDGEKCTNTHSPSNVTGEKSTVEDLPPGWIKEVKIRKHRSGIKKDWFYIDPVSGYVFHSKKDVTRYLESGDISRCAMKPSRRQHQDEDNSTPSPAAKRQKPKQSTTPVQKNFVAEELVESLELPDVNNSRKGQDVNVPSGTMVSPDTSGESLKVGRRFSQRLAGVEPVKLADNVTVTNDQTLLVPKRNLRKSRTTLAADMENKSPQHFNGVPEIEQPKATDTGNTLSEVVFKEQPRQLGRDKIEKNKPELHTNSNKSSKKKEPRIPCRASKRLAGSEPGLMNSISCEKTSKNKSKRSKEVIAELQKREGAQITELTDHAPLNGESGNKRIKSPKILPAGDNQPEKLEVDDEKSEPQLSFAFHYSWSDPCLDYAINTLTGVLPPVENSVDNGPSTVPETDIKKPAFDTVTRRSRGCQKNSDNGPATVHETDIQKTLFDNLTRRSKDSQNNLLDNVITSRDKNPPVPSNKSKRKKEVQVPMRLSKRLAGVEPEASPSDKALEYSSRKPCKEKPTANVVLTNGTSDHLYGGEETKLLKTEVPRESSRKSSKRLAGIEPEASPSDKALEYSSRKPCKEKPTANVLLTNGTSDYLYGGEESKLLKTRVLRESSRKSGKLYDAQTVQKEPQLQKVEAKNISDGSSKSELTLPFGESWSDPCLEFAFKTLTGALPVDSTAEIFKVMTPGVDNPPNNEFYGRVTTNMNGKTHDNSNHSRNMKECNMDGQSSKLLLGQPELRTSSTSGKNVPEFTNGESHHHEDNIIRNLEPVLRTSSISGKDVPNFITGESRSHDSDDIFRNLFGEPLYVEAENTTQLLHDSRTNAYSQIHEEPLKKIDQVAEGELCTSVQPPPFQTETLNHDNTGLQFCESFMNSWSDPCLEFAFKTLTGAIPVEDNLAIPGGIQEPANCHDGRDDVSALPDFGSSNFSQSDFSFHFDTGVKSTPGQQSSMSSSFPSLGLQGCPGVDPQQQYSQFNNNFQRR* 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 74 148 - -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 573 595 - -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 236 271 - -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 690 713 - -
Tpr3g0674 1137 SUPERFAMILY DNA-binding domain 186 239 IPR016177 GO:0003677
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 237 255 - -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 151 182 - -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 1 184 - -
Tpr3g0674 1137 Gene3D - 4 134 - -
Tpr3g0674 1137 Gene3D - 151 274 - -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 359 507 - -
Tpr3g0674 1137 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
Tpr3g0674 1137 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 177 256 IPR001739 GO:0003677
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 451 475 - -
Tpr3g0674 1137 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 29 102 IPR001739 GO:0003677
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 1 20 - -
Tpr3g0674 1137 Pfam Methyl-CpG binding domain 32 87 IPR001739 GO:0003677
Tpr3g0674 1137 Pfam Methyl-CpG binding domain 187 233 IPR001739 GO:0003677
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 256 271 - -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 626 641 - -
Tpr3g0674 1137 PANTHER OS04G0193200 PROTEIN 705 1129 IPR038945 -
Tpr3g0674 1137 PANTHER OS04G0193200 PROTEIN 591 695 IPR038945 -
Tpr3g0674 1137 PANTHER OS04G0193200 PROTEIN 3 479 IPR038945 -
Tpr3g0674 1137 PANTHER OS04G0193200 PROTEIN 499 595 IPR038945 -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 894 917 - -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 557 733 - -
Tpr3g0674 1137 CDD MBD 187 235 - -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 27 41 - -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 603 625 - -
Tpr3g0674 1137 MobiDBLite consensus disorder prediction 396 430 - -
Tpr3g0674 1137 PANTHER OS04G0193200 PROTEIN 3 479 - -
Tpr3g0674 1137 PANTHER OS04G0193200 PROTEIN 499 595 - -
Tpr3g0674 1137 PANTHER OS04G0193200 PROTEIN 705 1129 - -
Tpr3g0674 1137 PANTHER OS04G0193200 PROTEIN 591 695 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0674 - - mtr:MTR_8g096930 1175.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0674 3 6523522 6533546 Tpr3g0674 3 6523522 6533546 ECH