Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0660 ATGGAGGAACCGCCAAAAGCATCATGCTGGAGCAATATAGTGAAGAAAGAGCCACCGCCACCTCAAAAACCACAACCACTTTTACAAACCGAACAAGTTTTAGAAGATGCTCGTAACCATCATGGGATCTCCGTTGCCATTGTTGATGCAAATGCCGTTATTGCTGCCGGTGAAAAGCTTCACGGTATTGCTGATAAGTTTGTCTCTGTACCGGAAGTTATGGAGGAAATTCGTGACCCCGTTTCTCGCCATAAACTTTCGTTTCTTCCCTTTACTATCCAAACTATGGAACCAACCCCTGAATCTATCAACAAAGTTATCAAATTTGCTAGGATTACTGGTGATCTACAGACTCTATCAGATGTGGATATCAAACTCATGGCTCTAACTTATACTTTGGAGGCTCAGATTCACGGAACAAAACATCTCAGGGACAGCCCACCTCCGGTGCAAATGCTAAATGTGAAGAGGTTACCTGAGAAGGACATGCCTGGATGGGGGTCAAATGTTCCTAATTTGGAAGAGTGGGAAGCATTGGAACGCGAAACTGAGGATAATGCAAATTCCAATTCGAGAATCCTTCCTTTGCAGGACTTGAGTTTGAATGTTGTTGCTCAAGATGATCAATCTGTAGATGGTTCAGTAGAGCATACGAGTGAAAGTCCTTTGGGAATTCTGGAGGGTGATGAAAGTGGTGGTTCAATGAGCCGTAAGAATTATATGCCTGAGAAGAAAGTGATAAACATTGAAGGGAAGACGGTGGCTGATGGAATTGATGCATCTCAAGGACAAGTTGATGAAAATGAAGGTGATTGGATGCCTGCTGTCAGTCGTAGTACTCACAGGAGATTTCTAAGAAGGAAAGCTAGACGCGAGTACTATGATGCATTATCCAGTACTCAAGATCAACAAGATGTGGAAGAAAACATCGATGGTAGTGTTTATGAAGATGACACGGCTTCAAACTGTGATGTTCATCAAAGTGATGATGAGAAGCATATGGAAAATGTTGTTTCCAAGAAGGATGTGATATTTGCCGAGAACACTGATGGTGAAGCTCTCTCTGCAACTCTGAAGCAAATGACTCTGGAAGAAGGTTCTCTTGAAGTTCTTAATGAAGAACAGAAACTAAGTTTGTCTCCTGAAGAATTGCAGTCAGGCAATGATAGACTACTGGAAAGTGCATCAGATGGTAGTGCACTTATGGATGCTAAATCATGTGAGACAGATTCAGTCGATGACAAAGCAAGTCACTCGGAGATTGCAAGCCAGACCAGTGAAGCTGCTGATGTTTCATATGCAGATGATGGCACCAGTGAGCAAAGTTGGATGCTTAGATCTTTGTCCGAATCAACTGTGGCCTGTATAACCGGTGACTTTGCAATGCAAAATGTTCTCCTCCAAATGGGTTTGCGCTTGCTGGCACCTGGAGGATCACAGGTACACCAACTGCACAGATGGATACTTAAGTGTCATGCCTGTTTTGCTGTTACTGCTGAAATCGGAAGGATTTTCTGTCCAAAATGTGGAAATGGTGGCACCTTAAGGAAGGTAGCTGTCACTGTTAATGAAAATGGAGTAATGTTGGCAGCCCGTCGACCCCGAGTTACTTTACGTGGCACCAAGTTTTCATTGCCATTACCCCAAGGTGGAAGGGATGCAATGACAAAAAACGTTATTCTCCGTGAAGATCAACTACCTCAAAGGATACTTCATCCTAAAACAAGGAAGAAAGCCAACAAGGACGATGATTGCTTTCTGCCGGACAGTGTCTTCAGCCACCACAATTATAAGGGAACTCCTTTCACGCCTCCTGTAAGGAAAGCATTAGCAGTTTTCAGTGGGAAGAGAAATCCAAACGACAATCACTACTCACGCTCTAAGCGTAAGTAG 1893 0.4348 MEEPPKASCWSNIVKKEPPPPQKPQPLLQTEQVLEDARNHHGISVAIVDANAVIAAGEKLHGIADKFVSVPEVMEEIRDPVSRHKLSFLPFTIQTMEPTPESINKVIKFARITGDLQTLSDVDIKLMALTYTLEAQIHGTKHLRDSPPPVQMLNVKRLPEKDMPGWGSNVPNLEEWEALERETEDNANSNSRILPLQDLSLNVVAQDDQSVDGSVEHTSESPLGILEGDESGGSMSRKNYMPEKKVINIEGKTVADGIDASQGQVDENEGDWMPAVSRSTHRRFLRRKARREYYDALSSTQDQQDVEENIDGSVYEDDTASNCDVHQSDDEKHMENVVSKKDVIFAENTDGEALSATLKQMTLEEGSLEVLNEEQKLSLSPEELQSGNDRLLESASDGSALMDAKSCETDSVDDKASHSEIASQTSEAADVSYADDGTSEQSWMLRSLSESTVACITGDFAMQNVLLQMGLRLLAPGGSQVHQLHRWILKCHACFAVTAEIGRIFCPKCGNGGTLRKVAVTVNENGVMLAARRPRVTLRGTKFSLPLPQGGRDAMTKNVILREDQLPQRILHPKTRKKANKDDDCFLPDSVFSHHNYKGTPFTPPVRKALAVFSGKRNPNDNHYSRSKRK* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0660 630 MobiDBLite consensus disorder prediction 418 434 - -
Tpr3g0660 630 PANTHER - 3 628 - -
Tpr3g0660 630 PIRSF Nob1 29 630 IPR017117 GO:0000469|GO:0004521|GO:0042274
Tpr3g0660 630 PANTHER RNA-BINDING PROTEIN NOB1 3 628 IPR039907 -
Tpr3g0660 630 CDD PIN_Nob1-like 47 158 IPR033411 -
Tpr3g0660 630 Gene3D - 475 549 IPR036283 -
Tpr3g0660 630 MobiDBLite consensus disorder prediction 405 434 - -
Tpr3g0660 630 Pfam PIN domain of ribonuclease 47 133 IPR033411 -
Tpr3g0660 630 MobiDBLite consensus disorder prediction 1 26 - -
Tpr3g0660 630 Coils Coil 624 630 - -
Tpr3g0660 630 Pfam Nin one binding (NOB1) Zn-ribbon like 481 551 IPR014881 -
Tpr3g0660 630 Gene3D - 37 146 - -
Tpr3g0660 630 SUPERFAMILY NOB1 zinc finger-like 481 544 IPR036283 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0660 K11883 - gmx:100800291 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0660 3 6405140 6408922 Tpr3g0660 3 6405140 6408922 ECH