Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0658 ATGGAAGAGGAGAGCCAAATAATAAAGGGAAAATATGCTGCTGATATTTCATCTATAAAGGAAGCACATGACAGAATAAAATCATTGATTCTTAAAACTCCAGTTCTCTCTTCCGCCTCTCTCGATGCCATGTCAGGAAGGCAACTGCACTTCAAGTGTGAAAATTTCCAAAAGGGTGGAGCTTTTAAATTTAGAGGTGCCAGCAATGCTGTTTTTTCTCTTAATGATGAAGAGGCTTCTAAAGGGGTTATAACACACAGCAGTGGAAACCATGCTGCTGCATTGGCTTTGGCAGCAAAACTACGGGGGATCCCTGCATACATTGTTATTCCAAAAAATGCACCAACATGCAAAGTTGAGAATGTAAAGCGGTATGGTGGTCAGGTTATCTGGTCTGAGGCCAATATGCGATCAAGGGAAGAAGTTGCGAATAAAGTATGGCAAGAAACTGGTGCTATCTTTATACATCCGTATAATGATGGACGCATACTAAGTGGCCAGGGTACCATATCCTTGGAGTTTCTGGAACAAGCCCCTCAAATAGATACACTTGTGGTGCCGATAAGTGGTTTGTTCACTTTCTTATGTCAATCCATCAGCCAAAAATGTTTCAAAATTTGCTTTGCTTTTGGTATCCCTTTGTTGATTTTCCAACAAATGAAAACTGCAGGTGGCGGTTTGATATCAGGAGTAGCATTGGCTGCCAAGTCCATCAATCCGGCTATTCGTATTTTGGCTGCCGAACCTAAAGGAGCTGATGATGCAGCGCAATCTAAAGCGGCTGGGAGGATAATAACATTGCCTGAGACCAATACTATTGCCGACGGGCTTCGAGCATTCCTTGGAGATTTCACATGGCCTGTCGTACGAGATCTTGTTGAGGACATAATAACTGTGGAGGACAGTGAAATTATTAAAGCCATGAAACTGTGTTTTGAAATTCTTAAGATTGTGGTAGAACCAAGTGGAGCAATTGGTCTTGCTGCTGTTCTATCCGAAACTTTTCAGAAAAATCCTGCTTGGAAGGATTGCAAACATATAGGGATAGTAGTTTCGGGAGGCAATGTTGATATGGCTGTGCTTTGGGATTCTTTGAAAAAATGA 1104 0.4185 MEEESQIIKGKYAADISSIKEAHDRIKSLILKTPVLSSASLDAMSGRQLHFKCENFQKGGAFKFRGASNAVFSLNDEEASKGVITHSSGNHAAALALAAKLRGIPAYIVIPKNAPTCKVENVKRYGGQVIWSEANMRSREEVANKVWQETGAIFIHPYNDGRILSGQGTISLEFLEQAPQIDTLVVPISGLFTFLCQSISQKCFKICFAFGIPLLIFQQMKTAGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIADGLRAFLGDFTWPVVRDLVEDIITVEDSEIIKAMKLCFEILKIVVEPSGAIGLAAVLSETFQKNPAWKDCKHIGIVVSGGNVDMAVLWDSLKK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0658 367 Pfam Pyridoxal-phosphate dependent enzyme 222 353 IPR001926 -
Tpr3g0658 367 Pfam Pyridoxal-phosphate dependent enzyme 29 190 IPR001926 -
Tpr3g0658 367 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Tpr3g0658 367 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 222 367 - -
Tpr3g0658 367 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 31 190 - -
Tpr3g0658 367 Gene3D - 62 122 IPR036052 -
Tpr3g0658 367 CDD Thr-dehyd 16 357 - -
Tpr3g0658 367 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 14 364 IPR036052 -
Tpr3g0658 367 PANTHER - 31 190 - -
Tpr3g0658 367 PANTHER - 222 367 - -
Tpr3g0658 367 Gene3D - 219 363 IPR036052 -
Tpr3g0658 367 Gene3D - 128 194 IPR036052 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0658 K12235 - gmx:100799758 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0658 3 6390088 6392761 Tpr3g0658 3 6390088 6392761 ECH