Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0640 ATGGCTTTGCCATTTGTTACTCTTCCACACTTCATTTCTCCAACAATCACTCTAAAACCCAAACACTTCCTTCACCCATTTCCTTCTACACATTTCTTCCGTCCCTTATCTTCTTATCCTCTACTTCCTCTTCAACCTCCCGCCGCTACCAAACCCGACGGAGGACAATTCTATCCAAACCCAGCCGACGACGACCCACCCGAAATACCCGAAGATTCCGCTCACGGCTTCTCCAAATTCCAACAAATCCAACTCCAAGCCGACCGCGCTCGTAAACGCGAAGAACAAGATTACAAAGAAAATCAAGCCACTTACCTCGCCGCCATCGCCGACGTCCACGATGCTCCCGATGAACCTTCCACTATCGAATCCGCTCAAGACGATTTGTTCGGTGAAATCGACAAAGCAATCGCTCTTAAGCGTAAAGAGTTCGTTAAACAAGGTCTTCTTAAACCTAATCCCGCCAAACGGGATATTGAAATCGTTGAAGAGCTTCAACCTGATGAAGTCGATGATGTTGAAGAAATTGAGAAACTCCGGGGACTTGCGGTGAATTCTGATGAAACGCTGGGAGATTCCGTCGATGAAGATGGTAATTTATCTTCGAAATCCGAATCTTCGTTTGATTTAGATTTTGATAGTTTAGAGAAGAATAGTAAAGCTAGAATAGTTGAACCTAAGTTTAAGATGAGTTTAGCTGAGCTTTTAGATGAGAGCAAGGTAGTTCCTATTTCTGTTTATGGAAATTTGGAAGTTGAAATCAGTGGAATTCAACACGATTCGAGACTTGTAACGTCTGGTAATTTGTTTGTTTGTTGTGTTGGAAGTAAAAACGACGGACACACGTTCTTGAGTGAGGCTGATAAGAGAGGAGCTATTGCTGTTGTCGCGAGTAAAGAGATTGATATTGAAGATACTTTGGGTTGTAAGGCTTTGGTTATTGTGGAAGATACCAATGCTGTTCTTCCTACATTGGCTGCTTCGTTTTATAAGTATCCTTCGACAAACATGGCTGTTATTGGAATAGCTGGGACTTACGGCAAAACAACTACCACCTATTTGATTAAAAGTATGTATGAAGCCATGGGTTTACGCACTGGGATGTTTAACTCCATTGCTAGTTATGTGCATGGGGATAATCAGTTGGATTCACCTTATGAGATGATGGATGCTGTTTTAGTTCAGAATTTGATGGCTAAGATGCTTCAAAATGGAACTGAATCTGTGGTTTTTGAGGCTTCTTCTAGTGGACTGGCTCAGGGGAAATACGATGAGGTTGATTTTGATGTTGCTGTTTTTACGAATTTATTGACTGAGGAGGATGAGGAGGAGGAGGAAAGAGATGCGAAGGCTAAGCTGTTTTCAAGGATGGTGGATCCTGAGCGGCATAGGAAAGTTGTTAACATTGATGATCCAAATGCGCCATTTTTCGTTTCATTGGGCAGTCCTGAAGTTCCTGTTGTGACATTTGCTTTGGAGAATAAAAATGCAGATGTCCATCCCTTGAAATTTGAACTTTCTCTGTTTGAGACACAGGTGTTGGTTAATACACCTGCTGGGATACTGGAAATTTCGTCGGGATTATTAGGAAAGCATAATGTTTACAACATTCTTGCTGCTGTGGCAGTTGGCATTGCTGTTGGGGCACCCTTGGAGGACATTGTTAGAGGGATTGAAGAGGTTGATGCAGTTCCTGGGAGGTGTGAGTTAATTGATGAGGAACAAGCATTTGGGGTAATAGTGGACTATGCTCGTACTCCTGATGCCTTGTCTAGATTACTTGATTCTGTAAGAGAGCTTCAACCTCGCAGGATTATAACTGTGATTGGTTCTTGTGGTGAGGATGAAAGGGGGAAGAGACCCCTGCTGACAAAGATAGCAACAGATAAAAGTGAAGTCACCATGCTGACATCTGACAATCCCAAGGGTGAAGATCCATTGGATATTTTGGACGACATGTTGGCTGGGATAGGATGGACAATGCAAGATTACCTGAAATATGGAGAGAATGACTACTATCCTCCTCTTCCAAATGGTCATAGGCTTTTTCTCCATGACATTAGGAGGATAGCTGTGCGAGCTGCAGTTGCAATGGGGGAGGAGGGTGATGTTGTTGTGATTGCTGGCAAAGGCCATGAAACATATCAAATAGAAGGTGAAAAGAAGGATTTCTTCGATGACTCAGAAGAGTGCAGGGAGGCATTGCAGTATGTTGACGGCCTTCACCAAGCTGGAATAGATACAAGTGAATTTCCATGGCGGTTACCAGAGAGCCACTAA 2280 0.4316 MALPFVTLPHFISPTITLKPKHFLHPFPSTHFFRPLSSYPLLPLQPPAATKPDGGQFYPNPADDDPPEIPEDSAHGFSKFQQIQLQADRARKREEQDYKENQATYLAAIADVHDAPDEPSTIESAQDDLFGEIDKAIALKRKEFVKQGLLKPNPAKRDIEIVEELQPDEVDDVEEIEKLRGLAVNSDETLGDSVDEDGNLSSKSESSFDLDFDSLEKNSKARIVEPKFKMSLAELLDESKVVPISVYGNLEVEISGIQHDSRLVTSGNLFVCCVGSKNDGHTFLSEADKRGAIAVVASKEIDIEDTLGCKALVIVEDTNAVLPTLAASFYKYPSTNMAVIGIAGTYGKTTTTYLIKSMYEAMGLRTGMFNSIASYVHGDNQLDSPYEMMDAVLVQNLMAKMLQNGTESVVFEASSSGLAQGKYDEVDFDVAVFTNLLTEEDEEEEERDAKAKLFSRMVDPERHRKVVNIDDPNAPFFVSLGSPEVPVVTFALENKNADVHPLKFELSLFETQVLVNTPAGILEISSGLLGKHNVYNILAAVAVGIAVGAPLEDIVRGIEEVDAVPGRCELIDEEQAFGVIVDYARTPDALSRLLDSVRELQPRRIITVIGSCGEDERGKRPLLTKIATDKSEVTMLTSDNPKGEDPLDILDDMLAGIGWTMQDYLKYGENDYYPPLPNGHRLFLHDIRRIAVRAAVAMGEEGDVVVIAGKGHETYQIEGEKKDFFDDSEECREALQYVDGLHQAGIDTSEFPWRLPESH* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0640 759 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 564 736 IPR036615 GO:0009058|GO:0016881
Tpr3g0640 759 Gene3D - 333 567 IPR036565 GO:0005524|GO:0009058
Tpr3g0640 759 SUPERFAMILY MurD-like peptide ligases, catalytic domain 313 575 IPR036565 GO:0005524|GO:0009058
Tpr3g0640 759 PANTHER MUR LIGASE FAMILY MEMBER 207 749 - -
Tpr3g0640 759 Gene3D - 231 331 - -
Tpr3g0640 759 PANTHER UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE MURE HOMOLOG, CHLOROPLASTIC 207 749 - -
Tpr3g0640 759 Hamap UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 230 735 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Tpr3g0640 759 Pfam Mur ligase middle domain 342 543 IPR013221 GO:0005524|GO:0009058|GO:0016881
Tpr3g0640 759 Gene3D - 569 744 IPR036615 GO:0009058|GO:0016881
Tpr3g0640 759 Pfam Mur ligase family, glutamate ligase domain 564 647 IPR004101 GO:0009058|GO:0016881
Tpr3g0640 759 SUPERFAMILY MurE/MurF N-terminal domain 230 333 IPR035911 -
Tpr3g0640 759 TIGRFAM murE: UDP-N-acetylmuramyl-tripeptide synthetase 252 736 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Tpr3g0640 759 Pfam Mur ligase family, catalytic domain 253 330 IPR000713 GO:0009058|GO:0016881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0640 - - mtr:MTR_8g098345 1256.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0640 3 6273117 6277062 Tpr3g0640 3 6273117 6277062 ECH