Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0635 ATGCCACCATTTGCGGGTTCTCATCCAACAAGAACAGATTCAAACATAGTCACAATCGACGTTGGAGGACAAATGTTCCAAACAACTAAACAAACATTAACCTCAGCAGGACCAAAAACTTTCTTCTCATCAATCTCACAAACTTCTTCACTTTTCACACCTTTCATAGATAGAGACCCTGAAATTTTCTCACTCCTTCTCTCTCTCCTCAGAACCGGTAATCTTCCATCAAAAGCCAAATCATTCGATCTTCAAGACCTAATTATTGAATCTCAATTTTACGGTATTGAAAATCTCTTAATCAATTCTCTCTCTAATCCTGAACAATTAGAACCTTTCAATCTTCAAAAATCGATTCAGTTACCTTTAAACGGAAGAGATTCACCTTCCACCGTCGCAACCACCCCTTACGGTTCTCTTCATGTTGCTCACGGTAGTAAGATTACGACGTTTGATTGGTCTCTTCGTCGGAAATCGACTGTTTTAACGCACTTTACGGCCGTTGATTCTCTACTTGCTTTATCGCCGTCGCTTGCCGCTGCCGGTGCTAATGATTTCTCCGGTCTTCAGATTCTTGATTTGGAAAACGGTTACGTGAAAGATACGTTAAATTGGGAAAACGTAACGAAATCTGGTTCTACAGTTCAAGCTATTGGATCTTCGCCGGAGCAAATGTTTGTAAGCTTTGAATCTTCTCGGAGAAACTCGAATTCGATTGTTGTTTATGATTTGCATAGTTTGAGACCAGTAACAGAAATTGCACACAATGAGATCTATGGTGCTGATATTGATTCAGCGATTCCGGCGACGAAATTGCAGTGGATTGAAAGTCATAATCTGTTAATGGCGTCTGGGTCTCACAGTGGTCCTTCCGGCGTTTCCGGTAATATTAGGTTATGGGATGTTCGTTCCGGTAACGTTGTTTGGGAGATTTCTGAGAAAGTTGATTGTTTTGCTGACGTGGCAGTTTCTGATTCATTGAATGCTATGTTCAAAATTGGTGTGAATTCTGGGGAAACGTTTTATATGGATATGAAGAATTTGGGTGCTGAGAAAAATTCATGGGTTTGTTTAGGTGATAAGAGAAAGGTTTTGAATGGGAAAAAAGAAGGTTTTGGTTGCAAAATTGAAACACAAGGGAATCAAGTTTTTTGTACTAAAGGTGGTGATGTTGAACTTTGGTCAGAGATTATAATGGGTTCTTCTAATAACAGGATTTTCAAGAAGAATTTGATGGGAAGAGTGCAAGATATGGGAGGTGCTAAGATTACTAATTTGGCCTTTGGTGGAAGTAGAATGTTCTTGACTAGAAAGGATTTGCAATGTGTTGAAGTTTGGCAGAGTTCTTCAAGGGAACTTTGA 1362 0.395 MPPFAGSHPTRTDSNIVTIDVGGQMFQTTKQTLTSAGPKTFFSSISQTSSLFTPFIDRDPEIFSLLLSLLRTGNLPSKAKSFDLQDLIIESQFYGIENLLINSLSNPEQLEPFNLQKSIQLPLNGRDSPSTVATTPYGSLHVAHGSKITTFDWSLRRKSTVLTHFTAVDSLLALSPSLAAAGANDFSGLQILDLENGYVKDTLNWENVTKSGSTVQAIGSSPEQMFVSFESSRRNSNSIVVYDLHSLRPVTEIAHNEIYGADIDSAIPATKLQWIESHNLLMASGSHSGPSGVSGNIRLWDVRSGNVVWEISEKVDCFADVAVSDSLNAMFKIGVNSGETFYMDMKNLGAEKNSWVCLGDKRKVLNGKKEGFGCKIETQGNQVFCTKGGDVELWSEIIMGSSNNRIFKKNLMGRVQDMGGAKITNLAFGGSRMFLTRKDLQCVEVWQSSSREL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0635 453 SUPERFAMILY WD40 repeat-like 122 347 IPR036322 GO:0005515
Tpr3g0635 453 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 10 451 IPR045068 -
Tpr3g0635 453 SUPERFAMILY POZ domain 14 102 IPR011333 -
Tpr3g0635 453 CDD BTB_POZ_KCTD-like 17 94 - -
Tpr3g0635 453 Pfam BTB/POZ domain 17 103 IPR003131 GO:0051260
Tpr3g0635 453 Gene3D - 130 453 IPR015943 GO:0005515
Tpr3g0635 453 Gene3D Potassium Channel Kv1.1; Chain A 5 113 IPR011333 -
Tpr3g0635 453 PANTHER PROTEIN BINDING PROTEIN 10 451 - -
Tpr3g0635 453 SMART BTB_4 15 111 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0635 Tpr-Chr3 6236838 6238688 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0635 - - gmx:100792189 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0635 3 6236838 6238688 Tpr3g0635 3 6236838 6238688 ECH