Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0612 ATGCCTGCAACGACAGAAAACAATCAAGGATCCTTTTTGGGTCGAATAAGCATTCGAAGAAACCAAGTTATGTCAATGGATGGTAGTCATGATCAAGAGCTAGAAGACCTTGAACTTTTCCAAAAACACGTTGGTGATAGATTCTCCGAATTATTATCTTCCACAACAGATGACCCTTCCAACGACGCTCTTCTTTCCATTGGATGGCTTCGAAGACTTCTCGATGAGCTTCTTTGTTGTGAAGCCGAATTCAAAGCTGTTGTTATGATGGGCCGTGATCCTTCTCAAATTGCCAAACCACCTCTTGATAGACTCTTGCCGGAACTCCTTGATCGCGTTGTTAAATCGCTTGACATTTGCAATGCTGTTACTCTTGGCATTGATGCTGTCCGGAATCTCCAGAGGCTAGCTGAGATCGCGGTAGCTGCTCTTGAACCTAGACCCATGGGTGATGGACAAGTCCGAAGGGCGAAAAAGGCATTGAATTCTCTTGTGGCCGCCATGATGCATGAAGACAGAGATTGTGGAAGTAGCAAGGGAACGGAGAGAAGCAGGTCCTTTGGAAGAAGAGGAAATGCGAATAAGGATCGTGGTGGTGGAACTTTCCGGTCACTTTCATGGACAATGGCGAGGAATTGGTCAGCTGCGAAACAAATCCACGCCATGTCATCAAATTTGGCTGCGCCACGTGGCGCTGAGGCAACGGGTTTGCCTTCACCGATTTACATAATGAGTACTGTATTGGTATTTGTGATGTGGACTCTTGCTGCAGCGATTCCTTGTCAAGAGAGGAATGGGCTGGGCACCCATTTACCGTTTCCGAGGCAATTGAGCTGGGCCCAGCCCATGATTAGTTTGCAAGAGAAGATGGCTGAGGAGTGGAAGAAGAAGGAAAAGAAAGGTTCTGTTGGATTGTTGGAAGAGATGCAAAAGATTGAAAAAGTTGGACAGTTGTTGATTGATTTTGCTGAGTCTTTTCAGTTTCCCGGCGAATCGGAGCGTTTAGAAGAGATTAGGGGACATGTGGAAGAATTGGCTGATATTTGTAGGAAGATGGATGAAGGGTTGGAACCTTTGCAGTTACAAATTAGAGAAGTTTTTCACAGGCTTGTTAGGACCAGGTCTGAGTTTCTTCATGTTTTGGACCAAGCTGTGAAATTGTCTGCACCTACTGTGTAA 1179 0.4563 MPATTENNQGSFLGRISIRRNQVMSMDGSHDQELEDLELFQKHVGDRFSELLSSTTDDPSNDALLSIGWLRRLLDELLCCEAEFKAVVMMGRDPSQIAKPPLDRLLPELLDRVVKSLDICNAVTLGIDAVRNLQRLAEIAVAALEPRPMGDGQVRRAKKALNSLVAAMMHEDRDCGSSKGTERSRSFGRRGNANKDRGGGTFRSLSWTMARNWSAAKQIHAMSSNLAAPRGAEATGLPSPIYIMSTVLVFVMWTLAAAIPCQERNGLGTHLPFPRQLSWAQPMISLQEKMAEEWKKKEKKGSVGLLEEMQKIEKVGQLLIDFAESFQFPGESERLEEIRGHVEELADICRKMDEGLEPLQLQIREVFHRLVRTRSEFLHVLDQAVKLSAPTV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0612 392 MobiDBLite consensus disorder prediction 172 192 - -
Tpr3g0612 392 Pfam Protein ROH1-like 6 381 IPR008511 -
Tpr3g0612 392 PANTHER BPS1-LIKE PROTEIN 1 384 - -
Tpr3g0612 392 MobiDBLite consensus disorder prediction 172 199 - -
Tpr3g0612 392 PANTHER OS02G0109200 PROTEIN 1 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0612 Tpr-Chr3 5999146 6001244 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0612 - - lja:Lj4g3v2990070.1 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0612 3 5999146 6001244 Tpr3g0612 3 5999146 6001244 ECH