Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0611 ATGCCTTCTTCAGTTCGCCGATTAACGATGGCAGTTATAACTAACTCCTTATCACTCAAACACACTCTCTCTCTTGGTTGCCCCCAAACAAAATTTCTTACTCGTCGTCCTTCTTCCACTTCCATCTCATTCAGAAGATGTTATGCATCTTACGCAAATGAAAATCGCGAGTATGTCATCGTTGGCGGAGGAAACGCGGCGGGATATGCTGCTCGTACTTTCGTAGAGCACGGCGTCGCCGATGGACGTCTTTGTATTGTTACAAAAGAGGGAGTTGCACCTTACGAGCGTCCCGCATTAACAAAAGCCTACTTGTTCCCACCGGAAAAGAAACCTGCACGTCTTCCTGGGTTTCACACTTGTGTTGGATCCGGTGGCGAAAGGCAAACTCCCGAGTGGTATAAAGAGAAAGGGATTGAGATGTTATATGAAGATCCAGTAGAAAACATTGATATTGAAAAGCAAACCTTGACAACAAGTTCCGGAAAGCTTCTTAAGTATGGATCACTTATTATCGCTACAGGATGTACATCCTCAAGGTTTCCAGACAAAATTGGGGGAAACTTATCTGGTGTTCACTATATTCGGGATGTTGCCGATGCTGATTCACTGGTTTCATCGTTGGAAAAAGCAAAAAAGGTTGTAGTAGTTGGAGGTGGTTATATTGGAATGGAGATTGCTGCTGCAGCTGTTGCTTGGAAACTTGATACAACAATCATATTTCCAGATGATCATTTTTTACAAAGATTGTTCACTCCTTCTCTTGCCCGGAGATACGAAGAACTCTACCAAAAGAATGGAGTCAAAATATTGAAGGGTGCCTCCATTAAAAATTTGGAAGCTAGTTCTAATGGTAATGGACGTGTAGCTGCTGTGAAACTTGAAGATGGATCTACTGTTGAAGCTGATACGGTAATTATAGGTATTGGTTCAAAGCCTGCTGTGGGTCCCTTTGAGAGGGTGGGTTTGAATACTGATGTCGGTGGTATACAGGTTGATGGACAGTTCCGGACAAACATTCCTGGAATATTTGCTGTTGGTGATGTAGCTGCTTTCCCTTTAAAGATCTACAACCGTATTTCTCGAGTGGAACATGTAGATCATGCTCGTAGATCAGCACAGCACTGTGTGAAAGCATTACTCAGTGCACAATCTAGCACATATGATTATCTTCCATACTTCTACTCGAGGGTTTTTGAATATGAAGGAAGCACTAGAAAAGTATGGTGGCAGTTTTTTGGAGACAATGTTGGAGAAACAGTAGAAATTGGAAACTTTGATCCTAAAATAGCAACATTTTGGATTGAATCTGGTAAGCTGAAGGGAGTTCTTGTTGAAAGTGGGAGCCCTGAGGAATTTAAGCTCCTGCCTGAACTTGCGAGAAGGCAGCCTCCAATTGATAAAGCCAAACTTCAAAACGCAAGCTCAGTGGAGGAGGCCCTAGACATTGCTCGAGGATCCTTGCAAGCAGCTGTCTAG 1479 0.4307 MPSSVRRLTMAVITNSLSLKHTLSLGCPQTKFLTRRPSSTSISFRRCYASYANENREYVIVGGGNAAGYAARTFVEHGVADGRLCIVTKEGVAPYERPALTKAYLFPPEKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMLYEDPVENIDIEKQTLTTSSGKLLKYGSLIIATGCTSSRFPDKIGGNLSGVHYIRDVADADSLVSSLEKAKKVVVVGGGYIGMEIAAAAVAWKLDTTIIFPDDHFLQRLFTPSLARRYEELYQKNGVKILKGASIKNLEASSNGNGRVAAVKLEDGSTVEADTVIIGIGSKPAVGPFERVGLNTDVGGIQVDGQFRTNIPGIFAVGDVAAFPLKIYNRISRVEHVDHARRSAQHCVKALLSAQSSTYDYLPYFYSRVFEYEGSTRKVWWQFFGDNVGETVEIGNFDPKIATFWIESGKLKGVLVESGSPEEFKLLPELARRQPPIDKAKLQNASSVEEALDIARGSLQAAV* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0611 492 PANTHER APOPTOSIS-INDUCING FACTOR 1 29 490 - -
Tpr3g0611 492 Gene3D - 393 479 IPR016156 GO:0016491|GO:0050660
Tpr3g0611 492 PRINTS FAD-dependent pyridine nucleotide reductase signature 59 78 - -
Tpr3g0611 492 PRINTS FAD-dependent pyridine nucleotide reductase signature 167 185 - -
Tpr3g0611 492 PRINTS FAD-dependent pyridine nucleotide reductase signature 213 231 - -
Tpr3g0611 492 PRINTS FAD-dependent pyridine nucleotide reductase signature 302 318 - -
Tpr3g0611 492 PRINTS FAD-dependent pyridine nucleotide reductase signature 328 350 - -
Tpr3g0611 492 Gene3D - 59 376 IPR036188 -
Tpr3g0611 492 PRINTS Pyridine nucleotide disulphide reductase class-I signature 57 79 - -
Tpr3g0611 492 PRINTS Pyridine nucleotide disulphide reductase class-I signature 213 238 - -
Tpr3g0611 492 PRINTS Pyridine nucleotide disulphide reductase class-I signature 303 317 - -
Tpr3g0611 492 PRINTS Pyridine nucleotide disulphide reductase class-I signature 343 350 - -
Tpr3g0611 492 Pfam Pyridine nucleotide-disulphide oxidoreductase 57 373 IPR023753 GO:0016491
Tpr3g0611 492 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 29 490 - -
Tpr3g0611 492 SUPERFAMILY FAD/NAD(P)-binding domain 50 380 IPR036188 -
Tpr3g0611 492 Gene3D - 181 310 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0611 Tpr-Chr3 5991273 5996471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0611 164 354 Acyl Lipid Metabolism Gene Families AT1G48030 26.368 2.44e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0611 K08232 - gmx:100819919 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0611 3 5991273 5996471 Tpr3g0611 3 5991273 5996471 ECH