Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0606 ATGAAGTGCAAATCCGTTGCGTGCATATGGTCAGGCACACTCTTCCCTTCCGCTCACAAAGTTACCGCCGTCGCCGCTTTCACCCAACCACCGTCTCCCGCCTTTTACACCGCCGGATCCGATGGCTCCATCATCTGGTGGTCCCTTTCCACTTCCTCTCCGGAAGTTAAAGCGGTTGGAGTGTTGTGTGGTCATGCATCACCTGTCACTGATCTCGCTCTTTGTAGTCCAATTGCAGCTGAAGAAAACGATACGGTTTCAAGTAGAAATAATTTCAGTGCTTTGATTAGTGCTTGTTCCGATGGTTTCTTGTGTGTGTGGAGTAAAAGTAGTGGACATTGTCGTTGCAGAAGGAAATTGCCACCTTGGGTTGGTACTCCTCTTGTAATTCGAACATTGCCTTCGACTCCAAGATATGTATGTATAGCTTGTTCTTTTGTGGATAATTATTCTGTTAATGATGAGTTAGGAGATAGAGAAAATCATCATAGGAATAACTCTAAATCTACTATCCTTATTGTGGATACGTATTTGCTTTCCATTACTCAAACTGTTTTTCATGGAAATTTATCCATTGGTTCTATCAAGTTTATGTCACTAGTTTTTTCTGACGATGATGAGAAGAGGAATTCAGTGTTTGTGGCCGATTCTTATGGGAAACAACAGATGGTTCAAATATCGGATGAGTCTCGTAATTGTGTGGAAAATTTGGTGAGTCCGCACAGTGACAAGTTTCCATTGGGAAGTTCTTTTCCTGTGGAGGGATTCAGCGGTGTGGATGAAGTTATTTCAGTTTTGACGTTCGGGAACATTGTTGCTTTTATATTGAAAGATAGATGTATTTTTAGGCCATTGTCTAGCGATATCACGATTGGAGAGGTTTCTTTTGTGAACAACCTCTTCTTTTCGGATGAGAATTCCAGTGAAGCTCATGCTATTGGTGGCGTTGTTCTTGAAAGTGATGATATGGGGAATTCGCCTGATACATATGAATGCAGCAACTTCATTCCAGTATATTTTGTTGTGTGGAATAATAGAGGTTATGCAATTACCTATGAAGTATCGTATCAGAATGATGTTTTTCAGTGTGAACCGTATTCTGAGATTCCTGGTGGTCATTATCAATCTGATATAAGATTATCCATTTTTTTCCAACAAGTAAATCAAAATCTCGTGTGTATCAAGTCAGTTTGCTTTCATCATGAGGAACCTTTACTATGGAGACCACATATCACAATTTGGTCGCTGCATCAATTTGATGATAAACCCGGAAAATTGTGCCGTCAGTGCAGAATGATTAATGATGGTGTATCTTCCACCAACTGGTTTGAGACGTCTACTCAACTCAATAGTCATGATGACCTAGAGACTAAATCAACCTTTGGTGGTGCAAGTCCAGGTTCTGAAGACATAGGCAACATGCATAAGGATAGCATATGTAGTTATTATCCTTACAAGGGGAAGATAGTTTCTTCTTCCATGATTGTTGCTGAAAACCTTTTTACACCTTATGCCATCGTATATGGATATTTTAGTGGCGAAATAGAGGTCGTAAGATTTGATCAGTTTCAAGGGATTTTCCTAGACGATGCAAGTTCTAATCATGATGAAAAGTCAACTGCCCGCAAACAGATTTTCTCAGGACATACAGGTTCTGTACTTTGTTTGGCAGCACATCAAATGATGTGTAGTGCAGAAAGCTCCACCTTTAAACGGGTTTTGGTGTCTGGCAGTATGGATTGCACAGTTCGTATATGGGATCTTGACACTGGCAGTCTTATTAAGGTAATGCATCATCATGTCGCCGCTGTGCGTCAAATTATTCTTCCCCCATCAATGACAGCACATCCTTGGAGTGACTGCTTTCTTTCAGTGGGAGAGGATGCATGTGTTGCCCTTGTTTCTCTTGAGACTCTGCAGGTGGAAAGAATGCTTCCTGGACACATGAACTATCCCTCAAAAGTTTTATGGGATGGTGCAAGAGGTTATATTGCCTGTCTCTGTCAATCACATTATGGAACTTCCGATAGGGATGTATTATACATTTGGGATGTAAAGACAGGTTCTCGTGAGCGACTACTACGTGGGACAACTGCACATTCAATGTTTGATCATTTTTGTAAGAATATCAGTCTGAATTCTATACCTGGCTCTGTGCTGAATGGAAATACGTCAGTCTCTTCATTACTTCTTCCAATAGTTGATGATGCAAGGTTCCCTAACTCACCCTTAAGTCATACAGAGAACTTGCTTACTTCATCAAAGTCATCACCAAATATTTCAAGTATGAATGAGCTGAATTCTTTAAAACCAAATGTAGGTAAAGGAAGTTCAGCAAAGCCAAATTCATCTTTGTTTGGTCTTTTGAGAAACAACCTTCCTATCAAATGCTCTTGCCCGTTCCCTGGTATTGTGTCTCTGAGTTTTGATCTTGCATCATTGATGTTCTCTTTTCAAAAGAATGAGTCCAAGAAGACTGGTGATGGCAAGCCAGTGAATATCAATTTCAAGCAGAAGGGTGTTCAGGAGCAAATTCCAAGCTCCCATAATCCAGAAACATCAGAAGGGTGTGATTGGGTTAGCCTTTTTGAAGAATATTTACTGCGATACAGTTTGTCATTTTTACATTTGTGGAACGTAGACAGTGTGCTTGATAATTTGCTGATAAGTGATATGAAACTAAGGAGACCAGAAAATTTTATGATAGCTTCGGGCCTGCAGGGAGATAAAGGGTCATTGACATTGTCATTTCCTGGTCAGAGTGCTACTCTTGAGCTGTGGAAATCCTCATCTGAGTTTTCTGCAATGAGATCGTTGACAATGGTATCCCTTGCTCAGCGTTTGATTAGCTTGTCTCACTCAAGTTCAGCTGCCAGCAGTGCATTAGCAGCATTCTATACCCGAAATTTCATGGAAAATTTTCCAGATATGAAGCCACCTTCGCTACAGCTCTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTACGTATGGCTGCACGCTCTATATTTCACTGTGCTGCCTCTCATGCTATTCCTTTACCTCTATGCAATTCAAAATCCAATGAGTCAAATAATACAATCTCCCGAACTGGAAGTAGAGACAAACGCCAGGGAGATGCGATAGTAGAAAGCATATCACCTAATGCCAAAAAGCAAGGAATTTCCCAAGAAGAGGAATCCAAGATACTTAATTGGCTAGAATCTTATGAAGTGCAAGATTGGATTTCTTGTGTTGGGGGAACAAGTCAAGATGCAATGACATCTCACATTATTGTTGCCGCTGCACTGGCTATCTGGTATCCTAGTCTTGTAAAACCTAGGCTTTCCATGTTAGTTGTTCATCCATTAATGAAGTTGGCTATGGCCATGAATGAGAAGTACAGCTCCACTGCTGCTGAGCTCCTTGCAGAGGGCATGGAGAGCACGTGGAAAGAATGCATGGTCTCTGAGATTCCCCGTCTAATTGGGGACATTTTTTTCCAAGTAGAGTTGAGTGGTCCATCTTCCAAGTCAGCGACAGAAACTCCAGCTGCATCTTTTTCTATTAAACAGACTTTGGTGGAGATTCTCCTTCCAAGTGTAGCAATGGCTGATATACCAGGATTTTTGGCAGTGATTGAAAGCCAAATTTGGTCAACTGCATCTGATTCACCTGTCCACTTGGTATCCTTGTTGACTCTCATAAGGATTACGCGTGGTTCTCCAAGATATTTGGCTCAGTACCTTGACAAGGTTGTCAACTTCATTTTACAGACTATAGATCCTAGCAACTCAGTTATGAGGAAGGCGTGCTTCCAGAGTTCAATGACAACTTTCAAAGAAGTTGTACGCGTATATCCTATGGTTGCTGTCAATGAGTCTTGGACCAGACTTGCAGTTGGAGATGTGATTGGAGAAGTTAACAATGCAAGCATTAGGGTTTATGATATGCAAAGTGTGACAATGATAAAGGTTTTGGATGCAAGTGGGCCTCCTGGACTTCCAAGTTTGCTCACAGCAACGGCTTCGGGAACAGTGTTAACTACTGCAATCTCAGCGCTAAGCTTTTCACCGGATGGAGAGGGGCTGGTTGCTTTTTCGGAACATGGGCTCATGATTAGATGGTGGTCACTGGGATCTGTCTGGTGGGAGAAACTAAGCCGGAACTTCGTTCCTGTCCAGTGCACAAAACTAATATTTGTTCCTCCTTGGGAGGGATTCTCACCTAATTCATCCCGGTCAAGCATTATGGCTAGTATTTTAGATACTGAAAAGCAGCAGAATTTGCAGGATAATGCGAAAGATTCAAATCATGGGGAGAGTTTGAAGCAATTGCTCCATAATCTGGACCTCTCTTATCGATTAGAATGGGTTGCTGAACGGAAAGTACTTCTTACAAGGCATGGTAGTGAATTGGGAACTTTTCAGTTGTAA 4416 0.4153 MKCKSVACIWSGTLFPSAHKVTAVAAFTQPPSPAFYTAGSDGSIIWWSLSTSSPEVKAVGVLCGHASPVTDLALCSPIAAEENDTVSSRNNFSALISACSDGFLCVWSKSSGHCRCRRKLPPWVGTPLVIRTLPSTPRYVCIACSFVDNYSVNDELGDRENHHRNNSKSTILIVDTYLLSITQTVFHGNLSIGSIKFMSLVFSDDDEKRNSVFVADSYGKQQMVQISDESRNCVENLVSPHSDKFPLGSSFPVEGFSGVDEVISVLTFGNIVAFILKDRCIFRPLSSDITIGEVSFVNNLFFSDENSSEAHAIGGVVLESDDMGNSPDTYECSNFIPVYFVVWNNRGYAITYEVSYQNDVFQCEPYSEIPGGHYQSDIRLSIFFQQVNQNLVCIKSVCFHHEEPLLWRPHITIWSLHQFDDKPGKLCRQCRMINDGVSSTNWFETSTQLNSHDDLETKSTFGGASPGSEDIGNMHKDSICSYYPYKGKIVSSSMIVAENLFTPYAIVYGYFSGEIEVVRFDQFQGIFLDDASSNHDEKSTARKQIFSGHTGSVLCLAAHQMMCSAESSTFKRVLVSGSMDCTVRIWDLDTGSLIKVMHHHVAAVRQIILPPSMTAHPWSDCFLSVGEDACVALVSLETLQVERMLPGHMNYPSKVLWDGARGYIACLCQSHYGTSDRDVLYIWDVKTGSRERLLRGTTAHSMFDHFCKNISLNSIPGSVLNGNTSVSSLLLPIVDDARFPNSPLSHTENLLTSSKSSPNISSMNELNSLKPNVGKGSSAKPNSSLFGLLRNNLPIKCSCPFPGIVSLSFDLASLMFSFQKNESKKTGDGKPVNINFKQKGVQEQIPSSHNPETSEGCDWVSLFEEYLLRYSLSFLHLWNVDSVLDNLLISDMKLRRPENFMIASGLQGDKGSLTLSFPGQSATLELWKSSSEFSAMRSLTMVSLAQRLISLSHSSSAASSALAAFYTRNFMENFPDMKPPSLQLLVAFWQDESEHVRMAARSIFHCAASHAIPLPLCNSKSNESNNTISRTGSRDKRQGDAIVESISPNAKKQGISQEEESKILNWLESYEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPRLSMLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKECMVSEIPRLIGDIFFQVELSGPSSKSATETPAASFSIKQTLVEILLPSVAMADIPGFLAVIESQIWSTASDSPVHLVSLLTLIRITRGSPRYLAQYLDKVVNFILQTIDPSNSVMRKACFQSSMTTFKEVVRVYPMVAVNESWTRLAVGDVIGEVNNASIRVYDMQSVTMIKVLDASGPPGLPSLLTATASGTVLTTAISALSFSPDGEGLVAFSEHGLMIRWWSLGSVWWEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRSSIMASILDTEKQQNLQDNAKDSNHGESLKQLLHNLDLSYRLEWVAERKVLLTRHGSELGTFQL* 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0606 1471 Pfam WD domain, G-beta repeat 59 108 IPR001680 GO:0005515
Tpr3g0606 1471 Pfam WD domain, G-beta repeat 544 587 IPR001680 GO:0005515
Tpr3g0606 1471 ProSiteProfiles Trp-Asp (WD) repeats profile. 546 596 IPR001680 GO:0005515
Tpr3g0606 1471 SUPERFAMILY NHL repeat 1303 1373 - -
Tpr3g0606 1471 Gene3D - 4 243 IPR015943 GO:0005515
Tpr3g0606 1471 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1471 - -
Tpr3g0606 1471 SMART WD40_4 5 48 IPR001680 GO:0005515
Tpr3g0606 1471 SMART WD40_4 1329 1371 IPR001680 GO:0005515
Tpr3g0606 1471 SMART WD40_4 539 587 IPR001680 GO:0005515
Tpr3g0606 1471 SMART WD40_4 590 635 IPR001680 GO:0005515
Tpr3g0606 1471 SMART WD40_4 638 684 IPR001680 GO:0005515
Tpr3g0606 1471 SMART WD40_4 55 108 IPR001680 GO:0005515
Tpr3g0606 1471 SUPERFAMILY ARM repeat 953 1299 IPR016024 -
Tpr3g0606 1471 Coils Coil 1466 1471 - -
Tpr3g0606 1471 SUPERFAMILY WD40 repeat-like 13 701 IPR036322 GO:0005515
Tpr3g0606 1471 Gene3D - 496 770 IPR015943 GO:0005515
Tpr3g0606 1471 SUPERFAMILY WD40 repeat-like 28 442 IPR036322 GO:0005515
Tpr3g0606 1471 ProSitePatterns Trp-Asp (WD) repeats signature. 574 588 IPR019775 -
Tpr3g0606 1471 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1471 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0606 K24738 - gmx:100818675 2266.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0606 3 5945855 5956056 Tpr3g0606 3 5945855 5956056 ECH