Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0580 ATGGAGATAGAGAAACTGGAACTGGAAAATGAAGATAAAAAGCAAATGCACGCCTTGTTCGAAAGCCAATGTCATAATAAATTACAGGCACCGCTGGATTCTGTAAACAGACAGAAGAGAGAAGTTGAAGAACATTCAAGAGCCAAAGAACGTGAGTTGAACACTTTAAAGCAAAAGGAAATTGATTACGAAAATCAAATAAGTACTAACCAGAATGAGATCACTATCAGTGAACTGGCACGGAAGAATTTGGAGCTAGAAGACGACTTAGGTAAGTTGAAGAGAGAATTAACAGCGAGAACAAAAGACTGCTCTTCACTCCAACGTAAGCTTAATAAGGAAGGGATAGATGCTTCAGGAAAAATAATTGCCTTCAAAGCCGAAGTTGACAATCTGCAAAAGGACTTGCTTTCCTTGCAGAAAACAAAAGAAGAATTGGAGCTCAACTGTGAAAAACTCGGAGAAGAACGTGAAAAACTCATAAAAGAACATGCACAAACCCTCAAAATTTTTTACGATGAAAATAATGAATTAGCCAATCAAGTAATGGATCTTCAGAGAACATTGAAAGAACAGGAAGATGCACATCAGAAGTTGAATGAAGAATATAAACAAGTTGACAGTAGGTTTAATGAATGCAAGGTCAAACTTGAAGAAAAGGCAGAAGAGCTTCGTGAAAGCATTGCATCAAAAGATCAGATGGTAGATTGTTTGGAACATCAAGTTGAAGACCTTAAAAGAGACCTGGAAGACAAAGGGAATGAGACCAGAACTTCGCTTAAGAATGTCAGGAATCATGAGGAAAAGCTTCGCCTGTCAAACCAAAAGCTCCGGGTCACTGAACAATTGCTAAGTGAAAAGGAAGAAAGCTTTAGAAAGGCGAAAGAAGAGCTTCAGCAAGTTCAGAGAGAACTTGAAGATAGGAATGCTACTCTGGTAGCAAAAATCATTGCTAACAATAAAGCTTTTCATGAAACAATCACAGATATTAAAGTGTGTGTCGACAGTGTGAATATTGGGATAGATACTGTGAGCAACAAATGTTCCAATGACTGCAATAATTATGAGAACTCCATCGCAAACATCTCTCGCGAGCTTCAGGATGTAAAAGAATATGTCAGTGAGATGAATAGGGAAAAGGGGGAGTTACAGAAAGATAAAAAGCTTTTGTTGGAGGAACTGCAGGGAAAAAAGGAAGAGGAATTAACTCTGAGGGAGAAGGTCGAGAAGCTTGAGGCAAAGGCAAGAAAGGAGGAATCGGAGAAGATGAATGTGGTGGCTGATTTGGAACACCAAGTTGAAGACCTGAGGAAGTTGTTAAAAGAGAAAGAGGAAGGCATGAGACAGGAACAGATGGAGGCCATTAGGAAGCTCAGTTTGCAGATTGATAATCTCAAGGAAAACAAATCAAAGTCTCGCGGCTGTGGTTTGTGGTAG 1437 0.3925 MEIEKLELENEDKKQMHALFESQCHNKLQAPLDSVNRQKREVEEHSRAKERELNTLKQKEIDYENQISTNQNEITISELARKNLELEDDLGKLKRELTARTKDCSSLQRKLNKEGIDASGKIIAFKAEVDNLQKDLLSLQKTKEELELNCEKLGEEREKLIKEHAQTLKIFYDENNELANQVMDLQRTLKEQEDAHQKLNEEYKQVDSRFNECKVKLEEKAEELRESIASKDQMVDCLEHQVEDLKRDLEDKGNETRTSLKNVRNHEEKLRLSNQKLRVTEQLLSEKEESFRKAKEELQQVQRELEDRNATLVAKIIANNKAFHETITDIKVCVDSVNIGIDTVSNKCSNDCNNYENSIANISRELQDVKEYVSEMNREKGELQKDKKLLLEELQGKKEEELTLREKVEKLEAKARKEESEKMNVVADLEHQVEDLRKLLKEKEEGMRQEQMEAIRKLSLQIDNLKENKSKSRGCGLW* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0580 478 Coils Coil 214 255 - -
Tpr3g0580 478 Coils Coil 122 163 - -
Tpr3g0580 478 Gene3D - 167 331 - -
Tpr3g0580 478 PANTHER COP1-INTERACTIVE PROTEIN 1 5 466 - -
Tpr3g0580 478 Coils Coil 3 23 - -
Tpr3g0580 478 Coils Coil 168 209 - -
Tpr3g0580 478 Coils Coil 32 73 - -
Tpr3g0580 478 Coils Coil 263 315 - -
Tpr3g0580 478 Coils Coil 76 96 - -
Tpr3g0580 478 PANTHER COP1-INTERACTIVE PROTEIN 1 5 466 - -
Tpr3g0580 478 Coils Coil 352 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0580 Tpr-Chr3 5711291 5712865 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0580 - - mtr:MTR_8g099275 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3912 2 41822791 41824329 Tpr3g0580 3 5711291 5712865 PCT