Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0578 ATGAGGATCGATTCTTCTTTCAATCACAAAAATTACCTAATCAAGTTACTCCTCACTCTTTTCTTCTCACTCATAGCTTTTCGTCTTCTCTTTTTCCACTCTCTACCAACTCTCTTTGATTCCCCTCTTACCGACAAAACCACCGTTTCATCAGAACTTCAAATCCCACCTCAAAAATCTTCTCTTTCAGAGCTTCCACTAGACCCTCTTCAAAATGAAGAAGATGAAGCATCTCCCACCGACATGGGGAAATGTGATTATTTTAATGGTGATTGGGTACCAAATCCATTGGGTCCAATTTATACAAATGAAACTTGTGACCTTATTGAATCTCATCAAAATTGTTTGAAAAATGGAAGACCAGATAGAGAATTTTTGTATTGGAAATGGGCTCCTAGAGATTGTGAGTTACCTATATTTGATCCTTTAAGGTTTCTCAATATGATGCGTGGTAAAGTTTGGGCACTTATTGGTGATTCAATTTCTCGAAATCATGTTCAATCTTTGCTCTGCTCACTTTCTAAGGTAGAAAAAGCTGTCTTAGTTTATCACGATGAAGGATACAAGTCCAAAAGCTGGCACTTTCCTTCGTACAACTTCAGTATGTCAGTTATTTGGTCACCATTCCTTGTGGAAGCTGCTATTTTTGAAGACATAAACGGCGTTTCAAGTTCTGAAGTTGAGCTATATCTAGACAAACTGGATCGTAAATGGACGGATCAGTACCTGAGCTTTGATTACATTATTATTTCTACTGGCAAATGGTTTGTTAAATCTGCAATCTACCATGAGGCTGACACTATATTGGGCTGTCACGGCTGTTCTGAAAACAAGAACTTGACAGAACTAGGATTTGACTTTGCCTACCGCAAAACCTTGAAAAATGTCTTGAACTTCATAGTGTCTTCCAATCACAAGGGTTTAATTTTGTTCAGGACGTCCACACCTGACCATTTTGAAAATGGGGAGTGGTTTAGCGGGGGAACATGCAACAGAACTGCGCCGATTAAAGAAGGTGAGGTGGAAATAAAGGATTTACTCAGGATTCTTCGTGAAATTGAGTTAGAGGAGTTTAAAAAGGCAGCTTCCAAAGCTTCGAAAAAAGGAGTGAATCTCAAGCTTGCTGATTTTGTGCCACTTTCGCTTTTGAGACCAGATGGGCATCCGGGTCCATACAGGCAGTTTCAACCCTTTGCAAAGGACAACACTGCTAAAGTTCAGACTGATTGTTTGCATTGGTGCTTACCTGGGCCAATAGACTCTTGGAATGATATAATAATGGAGATGGTTGTTAATGGATAA 1302 0.394 MRIDSSFNHKNYLIKLLLTLFFSLIAFRLLFFHSLPTLFDSPLTDKTTVSSELQIPPQKSSLSELPLDPLQNEEDEASPTDMGKCDYFNGDWVPNPLGPIYTNETCDLIESHQNCLKNGRPDREFLYWKWAPRDCELPIFDPLRFLNMMRGKVWALIGDSISRNHVQSLLCSLSKVEKAVLVYHDEGYKSKSWHFPSYNFSMSVIWSPFLVEAAIFEDINGVSSSEVELYLDKLDRKWTDQYLSFDYIIISTGKWFVKSAIYHEADTILGCHGCSENKNLTELGFDFAYRKTLKNVLNFIVSSNHKGLILFRTSTPDHFENGEWFSGGTCNRTAPIKEGEVEIKDLLRILREIELEEFKKAASKASKKGVNLKLADFVPLSLLRPDGHPGPYRQFQPFAKDNTAKVQTDCLHWCLPGPIDSWNDIIMEMVVNG* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0578 433 MobiDBLite consensus disorder prediction 50 67 - -
Tpr3g0578 433 Pfam PMR5 N terminal Domain 84 136 IPR025846 -
Tpr3g0578 433 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 6 432 IPR029962 GO:0016413
Tpr3g0578 433 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 137 429 IPR026057 GO:0016740
Tpr3g0578 433 Coils Coil 336 356 - -
Tpr3g0578 433 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 24 6 432 - -
Tpr3g0578 433 MobiDBLite consensus disorder prediction 50 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0578 Tpr-Chr3 5700141 5703225 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0578 - - gmx:100778581 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0578 3 5700141 5703225 Tpr3g0578 3 5700141 5703225 ECH