Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0576 ATGGCAAATCCATCCAACAAAGAGATCAATCTCCTCAACGATGACGACGCCGGAGCTGCTTTCGTCCTCCAATCCAAAGGTGAATGGTGGCACGCTGGGTTTCACTTAACAACGGCAATAGTGGGTCCCACAATACTAACGCTACCATATGCATTCAGAGGTTTAGGATGGGGGATTGGGATGTTATGCCTAACAGTTATGGGTGTTGTAACTTTCTACTCTTATGGCCTTATGTCTAAAGTTCTTGATCATTGCGAAAGATCTGGTCGTCGCCACATCCGTTTCCGGGAACTTGCCGCCGATGTCTTAGGATCTGGATGGATGTTCTATTTTGTAATCTTTATCCAAACGGCAATCAATACTGGAGTTGGCGTAGGGGCAATCTTGCTTGCTGCTGAATGCCTTCAGATCGTCTACTCCAATGTTGTACCTCATGGATCACTGAAATTGTACGAGTTCATAGCAATGGTGACAGTGGTAATGATAGTTTTGTCTCAGCTTCCCACTTTCCATTCCCTAAGACACATCAACTTGTGTTCACTTTTTCTCAGCTTGGGCTACACCTTCCTAGTAGTTGGTGCTTGTATTCATGCAGGTACATCGAAAAATGCCCCTCAACGGGACTATTCCTTAGAACCCAAGAAATCGTCAAGGGCCTTCAGTGCCTTTACTGCCATTTCCATAATTGCAGCAATATTTGGGAATGGAATATTACCTGAGATACAAGCAACTCTAGCACCTCCTGCAGCTGGAAAGATGATAAAAGGCCTTACTATGTGTTATGCTGTAATTTTTGTTACATTCTACTCTGCTGCCGTTTCTGGATATTGGGTATTTGGAAACAAGGCCAATTCAAACATTTTGAAGAGTTTGTTGCCAGATGATGGACCTTCTTTGGCTCCAACTTGGGTTCTTGGACTTGCTGTCATCTTTGTTCTACTTCAGCTCTTCGCAATCGGTCTGGTTTATTCTCAAGTTGCTTATGAAATAATGGAGAAGAAATCGGCTGACGTGAAGCAAGGGATATTTTCCAAAAGAAATCTTCTTCCACGCCTAATTCTTCGGACAATTTACATGATTTTCTGTGGATTTCTGGCCGCCATGTTGCCATTTTTTGGAGACATAAACGGTGTAGTTGGTGCTGTTGGCTTCATTCCTCTGGATTTTGTTCTGCCTATGATTCTATATAATAAAACACACAAGCCTCCAAAATCATCATTGACTTATTGGATCAACCTCTCGATCATGATCGTGTTCACTGGTGCAGGAATCATGGGTGCATTCGCTTCTATTAGGAAATTGGTTCTTGATGCCAACCAATTTAAGCTGTTTGGCAGTGATGTTGTAGATTGA 1353 0.4279 MANPSNKEINLLNDDDAGAAFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGIGMLCLTVMGVVTFYSYGLMSKVLDHCERSGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAAECLQIVYSNVVPHGSLKLYEFIAMVTVVMIVLSQLPTFHSLRHINLCSLFLSLGYTFLVVGACIHAGTSKNAPQRDYSLEPKKSSRAFSAFTAISIIAAIFGNGILPEIQATLAPPAAGKMIKGLTMCYAVIFVTFYSAAVSGYWVFGNKANSNILKSLLPDDGPSLAPTWVLGLAVIFVLLQLFAIGLVYSQVAYEIMEKKSADVKQGIFSKRNLLPRLILRTIYMIFCGFLAAMLPFFGDINGVVGAVGFIPLDFVLPMILYNKTHKPPKSSLTYWINLSIMIVFTGAGIMGAFASIRKLVLDANQFKLFGSDVVD* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0576 450 PANTHER OS05G0424000 PROTEIN-RELATED 19 444 - -
Tpr3g0576 450 PANTHER GABA TRANSPORTER 2 ISOFORM X1-RELATED 19 444 - -
Tpr3g0576 450 Pfam Transmembrane amino acid transporter protein 26 432 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0576 Tpr-Chr3 5683003 5687371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0576 14 450 Organic Solute Cotransporters AT5G41800 81.007 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0576 - - gmx:100815232 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0576 3 5683003 5687371 Tpr3g0576 3 5683003 5687371 ECH