Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0567 ATGAACAGAGAAACCGAATTGGTTGAACTTTGCATAAACGCAGCTTGTAAAAACAGAGAAACCGTTGAAAAATGGCGGTTACAGAAACGATCTCTCGATCGCTTACCTTCTCATCTCGCCGACGCTCTCCTCCGCCGTCTCATCACTCGCCGTCTCCTCCACCCCTCTCTCCTCGAGGTTTTCAAACACAGTGCGGAAGAGGTTGATGTAAAAGGTGATAACTCTGTGGATGCAGAATGGATGGCATATTTGGGAGGATTTCGCCATTTGCGTTATTTGAACATTGCTGAATGTCATCGAATCAATTCTTCAGCTCTTTGGCCTCTCACAGGAATGAATAGCCTTAAAGAGTTGGATCTATCTAGATGCTCCAAAGTTAATGATGCTGGAATTAATCATATACTTTCTGTTCCTAATTTGGAGAAGTTGCACATTTCGAAAACTAGCGTCACTGCCAAAGGAGTCAAGCTTCTAGCCTCTCTTAAAAACTTGTCTCTTCTTGACTTGGGCGGTTTGCCTGTCGATGATGCGTCTTTAGCTTCATTACAGGTACTGAAAAATCTACAACACATTGAACTCTGGGGTAGTAAAATATCAAACAACGGTGCTGCAGTTCTTAACACATTCCCCAAGTTAACCCATCTAAATCTTGAATGGACCAGCGTCACAAAATTGCCTAATTTATCATCTCTTGAATGCCTCAACATGAGTAATTGTACTATTGACTCTATACTTGAAAATGATAAAGCTCCTTTGACAAAGCTTATATTCTCTGGGTCTACATTCCTGAATGAAGCTGGAACCTTATTATATGCAAATACAAATAACCTGTCCTTTCTGGACTTGGCCCATACCGGCCTTGACAAATTCTTCTTCTTAAGTAAAATGAAAGTAATAGAACATCTCAATCTCAGCTCGTGTATGATGGATGATAATTCAGTTGAGATGGTTGCATGTATTGGTGGAAAGTTGAAAAGTTTGAATCTGAGTGGTACTTGGGTTAGCTCTGCTGGAGTAGGGATTTTAGCTGGACATGTTCCCAATCTTGAAATTCTATCACTATCTCAGACATCAGTGGAAGATACTGCCCTCGCATTTATCAGCTTGATGCCTTCATTGAAGGTTGTTGATCTGAGCAATACGAACATTAAAGGGTTTTTGCACCAAGGAGGGACTGACTTGGACTCACTCTCTCTAACGGCCCTACAAAATCTGAAACAATTAGAAAGGCTGAATTTGGAGCACACTCAAGTCACCGATGAAGCTTTATTCCCTTTATCAAGCTTCCAAGAGCTGAGATATTTATCTCTTAAAAGTCCTTCACTCTCAGACATCTCACTTTACCATCTATCATCAGTTCCTAAGTTGACAAAGCTTGGTATCTGTGATGCGGTATTGACAAATTGTTCTCTTGATAAGGTTAAGGCTCCTGAAAATCTGAAACTGATGGACCTCAGAGGTTGTTGGCTCTTAACCAAAGATGCTATCTTATCATTCAGTAGAAATCATCCACAAATTGAAGTCAGACATGAACTTGTTACGGTACTTCCTTTTGAAGAAAATGGACGTCAGCATTCATCTCCATCTCGATTAACTTCAAGGACTATGCAAGCAGCTAGGAAGAAAGAACAAACGTCCTTATCTCCATATTTCGTAGATCAAAGGATGAAATATAGCAGAGATGAGTTACTTGCATTGCAGTTTATGTCTCTGCCTCTTGCATCAAATAGTGAGAGAGACAACTCAACACTTGAGAAGCAATTGGATTCAATGTAG 1776 0.4043 MNRETELVELCINAACKNRETVEKWRLQKRSLDRLPSHLADALLRRLITRRLLHPSLLEVFKHSAEEVDVKGDNSVDAEWMAYLGGFRHLRYLNIAECHRINSSALWPLTGMNSLKELDLSRCSKVNDAGINHILSVPNLEKLHISKTSVTAKGVKLLASLKNLSLLDLGGLPVDDASLASLQVLKNLQHIELWGSKISNNGAAVLNTFPKLTHLNLEWTSVTKLPNLSSLECLNMSNCTIDSILENDKAPLTKLIFSGSTFLNEAGTLLYANTNNLSFLDLAHTGLDKFFFLSKMKVIEHLNLSSCMMDDNSVEMVACIGGKLKSLNLSGTWVSSAGVGILAGHVPNLEILSLSQTSVEDTALAFISLMPSLKVVDLSNTNIKGFLHQGGTDLDSLSLTALQNLKQLERLNLEHTQVTDEALFPLSSFQELRYLSLKSPSLSDISLYHLSSVPKLTKLGICDAVLTNCSLDKVKAPENLKLMDLRGCWLLTKDAILSFSRNHPQIEVRHELVTVLPFEENGRQHSSPSRLTSRTMQAARKKEQTSLSPYFVDQRMKYSRDELLALQFMSLPLASNSERDNSTLEKQLDSM* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0567 591 SMART LRR_CC_2 430 453 IPR006553 -
Tpr3g0567 591 SMART LRR_CC_2 405 429 IPR006553 -
Tpr3g0567 591 SMART LRR_CC_2 477 502 IPR006553 -
Tpr3g0567 591 SMART LRR_CC_2 161 185 IPR006553 -
Tpr3g0567 591 SMART LRR_CC_2 112 137 IPR006553 -
Tpr3g0567 591 Pfam Leucine Rich repeat 113 131 IPR001611 GO:0005515
Tpr3g0567 591 Gene3D Ribonuclease Inhibitor 156 222 IPR032675 -
Tpr3g0567 591 Gene3D Ribonuclease Inhibitor 12 149 IPR032675 -
Tpr3g0567 591 Gene3D Ribonuclease Inhibitor 388 472 IPR032675 -
Tpr3g0567 591 Gene3D Ribonuclease Inhibitor 223 387 IPR032675 -
Tpr3g0567 591 SUPERFAMILY L domain-like 324 503 - -
Tpr3g0567 591 ProSiteProfiles Leucine-rich repeat profile. 211 232 IPR001611 GO:0005515
Tpr3g0567 591 PANTHER F-BOX/LRR-REPEAT PROTEIN 13 1 582 - -
Tpr3g0567 591 Coils Coil 574 591 - -
Tpr3g0567 591 PANTHER RECEPTOR-LIKE PROTEIN 14 1 582 - -
Tpr3g0567 591 SUPERFAMILY RNI-like 79 384 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0567 - - gmx:100814174 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0567 3 5599273 5604348 Tpr3g0567 3 5599273 5604348 ECH