Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0552 ATGGATAACTTAATATCTTTAGTCAACAAAATTCAAAGAGCTTGCACCGCCTTAGGTGACCACGGTGAATCTAGTGCACTCCCTACACTTTGGGATTCTCTTCCCGCTATCGCCGTTGTCGGTGGCCAGAGTTCTGGAAAATCCTCCGTCTTGGAAAGCGTTGTCGGTAAAGATTTCTTACCTCGTGGATCAGGCATCGTTACTCGGAGACCACTGGTATTGCAGCTTCACAAGAGTGATGAGGGAACTAGAGAGTATGCAGAGTTTCTTCACCTTCCCAGGAAAAGATTCACTGATTTTGCTGCTGTGAGAAAGGAGATACAAGAGGAAACTGATAGAGAGACTGGACGGAGCAGCAAACAAATTTCAACTGTCCCTATTCATCTTAGCATATATTCTCCCATGGTTGTTAACTTGACACTCATTGATCTTCCTGGGCTTACGAAGGTAGCTGTAGAGGGACAACCTGACAGTATAGTGCATGACATTGAGAATATGGTTCGCTCCTACATTGAGAAGCCAAACTGTATAATTTTGGCTATTTCACCGGCTAATCAAGATATTGCAACATCTGACGCAATTAAAATTTCCCGCGAAGTGGATCCTACAGGGGAAAGGACCATTGGAGTTTTGACAAAGATTGATCTAATGGACAAAGGTACCGATGCTGTTGATATGTTGGAAGGGAGAGCATATAGGTTAAAGTTTCCCTGGATTGGTGTTGTGAATAGATCACAAGCAGACATAAACAAGAATGTTGACATGATTGCTGCAAGGCGTAGAGAACGTGAATACTTTAATAGTACTCCTGAATATAAACACTTAGCTAACAGAATGGGGTCTGAGCATCTGGCGAAGATGCTCTCAAAGCATTTGGAGACAGTAATCAAGTCCAAAATTCCAGGCATTCAGTCTCTCATTAGCAAAACAATTAATGAAATTGAAACTGAACTGACTCGTTTGGGAAAGCCTGTTGCAGCTGATGCTGGGGGCAAGTTATATGCAATCATGGAAATATGTCGCTCCTTTGATCAAATATTCAAAGACCATCTTGATGGCGTGCGACCTGGAGGTGATAAAATTTATAATGTCTTTGACAATCAGCTCCCTGCTGCTTTGAAAAGGTTGCAGTTTGACAAACAGCTTTCAATGGAAAATATAAGGAAACTTATTACAGAAGCTGATGGGTACCAACCTCATCTTATAGCTCCAGAACAAGGATACCGTCGTCTAATTGAATCCACTCTAGTTACTATCAGAGGCCCTGCCGAGGCAGCTGTTGATGCGGTTCATTCTCTATTAAAGGACCTGGTTCACAAAGCTGTTAGCGAGACTCTGGACTTGAAGCAGTATCCTGGTCTACGTGCTGAGGTTGGGGCTGCAGCTATTGATTCACTAGATAGAATGAGAGATGAAAGCAAAAGGGCAACACTACAACTGGTTGATATGGAATCTGGGTATCTGACGGTTGATTTCTTTCGGAAGCTTCCTCAAGATGTGGATAAGGGTGGCAACCCCACACATTCAATTTTTGATAGATATAATGATTCTTATCTAAGGCGAATCGGAACAACAATTTTGTCATATGTCAACATGGTGTGCGCTACTCTACGACATTCAATTCCTAAGTCTATTGTTTATTGTCAAGTCCGGGAGGCAAAACGAAGCCTACTTGATCACTTCTTCACTGATCTAGGAAAAATGGAGACAAAGCGTTTATCCTCATTACTGAATGAGGATCCTGCAATTATGGAACGTCGTAGTGGCCTTGGAAAGAGACTGGAGTTGTATCGAAGTGCCCAAGCTGAGATAGACGCAGTTGCTTGGTCTAAGTAG 1836 0.4265 MDNLISLVNKIQRACTALGDHGESSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKSDEGTREYAEFLHLPRKRFTDFAAVRKEIQEETDRETGRSSKQISTVPIHLSIYSPMVVNLTLIDLPGLTKVAVEGQPDSIVHDIENMVRSYIEKPNCIILAISPANQDIATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVDMLEGRAYRLKFPWIGVVNRSQADINKNVDMIAARRREREYFNSTPEYKHLANRMGSEHLAKMLSKHLETVIKSKIPGIQSLISKTINEIETELTRLGKPVAADAGGKLYAIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESTLVTIRGPAEAAVDAVHSLLKDLVHKAVSETLDLKQYPGLRAEVGAAAIDSLDRMRDESKRATLQLVDMESGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTDLGKMETKRLSSLLNEDPAIMERRSGLGKRLELYRSAQAEIDAVAWSK* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0552 611 Gene3D - 1 310 IPR027417 -
Tpr3g0552 611 Pfam Dynamin GTPase effector domain 515 607 IPR003130 GO:0003924|GO:0005525
Tpr3g0552 611 Pfam Dynamin central region 222 489 IPR000375 -
Tpr3g0552 611 ProSiteProfiles GED domain profile. 519 611 IPR020850 -
Tpr3g0552 611 PANTHER DYNAMIN 2 610 IPR022812 -
Tpr3g0552 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Tpr3g0552 611 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 301 IPR030381 GO:0005525
Tpr3g0552 611 SMART dynamin_3 1 252 IPR001401 GO:0003924|GO:0005525
Tpr3g0552 611 CDD DLP_1 33 301 IPR001401 GO:0003924|GO:0005525
Tpr3g0552 611 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Tpr3g0552 611 SMART GED_2 514 607 IPR003130 GO:0003924|GO:0005525
Tpr3g0552 611 Gene3D Dynamin, middle domain 333 587 - -
Tpr3g0552 611 PANTHER DYNAMIN-LIKE PROTEIN 1E 2 610 - -
Tpr3g0552 611 PRINTS Dynamin signature 34 52 IPR022812 -
Tpr3g0552 611 PRINTS Dynamin signature 59 76 IPR022812 -
Tpr3g0552 611 PRINTS Dynamin signature 133 150 IPR022812 -
Tpr3g0552 611 PRINTS Dynamin signature 183 201 IPR022812 -
Tpr3g0552 611 PRINTS Dynamin signature 202 218 IPR022812 -
Tpr3g0552 611 PRINTS Dynamin signature 225 244 IPR022812 -
Tpr3g0552 611 Pfam Dynamin family 37 214 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0552 Tpr-Chr3 5491819 5498180 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0552 - - gmx:547855 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0552 3 5491819 5498180 Tpr3g0552 3 5491819 5498180 ECH
Tpr2g3931 2 41954570 41960887 Tpr3g0552 3 5491819 5498180 PCT