Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0538 ATGGGTTGCGCATCTTCTAAACGTGTTGATGCCACCGCACCCGCCGTATATCAACCACCACCAACTAGCTTCGCCGTCTTTGACATAAACGCCATAGAAGAGCCATGGCTAAAACACCTCAACAACACAAACACCACCACAATCTCCCATGAAGAAAAACTCCCTCCCCCTATTCTCCACATCCTTGATGCCACTGAAAAATCTCCTCAATCATGGGATGAAGTTAGTAAAACACTTCAACACCTCAAACCCACCGTTCAAGTTCAACCACCACCACCATCACCACCACAAACACCACCACCATCACAACAATCACAACCACAACCACCACGTAAGGTTGCTTCATTTCACACACTTGAAGAATTAGATGCAAAATTAAGCCCAAAGAATAACACCAACAAAGATTCAAAATCAGATTCCAAACAACCACAAACACAGTTACAAAAAACAACAAAAGACGATGTTGTTGTTGGTGGTGCTGGTGCTGATGCTGGTGTTGGTTCAGTGAAAACATTACTACCTTCAGTATCATCGAAATTAAAGGATAACATATTCATAAAGAAAGATAGATTGGAGAAACAAAAAGAAGAGAAAGAATCAAATTTTGAAAGGTTAAGAAGAGACCCATTAAGTAACTACCCAGAAAAAATTCCACCAAACGGTAACGACGCTGTAGTAATATACACAACGTCGTTACGTGGTGTAAGAAAAACATTTGATAACTGTAACAAAGCAAGAGACTTGTTAGAAAATCACAGGGTGATTTTCGACGAGCGTGACGTGGCACTTCATGGTGGGTTTTTGAAGGAAGTTAAAGAGTTGTTGGTAACAGAAGAAGAATCAGGTGGTGGGGTTGTTTTGCCAAGGGTGTTTGTTAAGGGAAGATATTTGGGTGGTTTAGATGAGTTGATGGAGCTTGATGAAACGGGTAGACTTGGGAGGATATTGAATGCGACACGTGTGGAGAGAGGTGTTGGAAGACAAGGTTGTGGGGGGTGTGGTGGAGCAAGGTTTGTTCCTTGTTTTGATTGTGGTGGGAGTTGTAAGTTGGTTAGTTCTGTTGGTGGTGAAATTGAGAGGTGTCCTAAGTGTAATGAGAATGGGTTAGTTCATTGCCCTGCTTGTATTTGA 1131 0.42 MGCASSKRVDATAPAVYQPPPTSFAVFDINAIEEPWLKHLNNTNTTTISHEEKLPPPILHILDATEKSPQSWDEVSKTLQHLKPTVQVQPPPPSPPQTPPPSQQSQPQPPRKVASFHTLEELDAKLSPKNNTNKDSKSDSKQPQTQLQKTTKDDVVVGGAGADAGVGSVKTLLPSVSSKLKDNIFIKKDRLEKQKEEKESNFERLRRDPLSNYPEKIPPNGNDAVVIYTTSLRGVRKTFDNCNKARDLLENHRVIFDERDVALHGGFLKEVKELLVTEEESGGGVVLPRVFVKGRYLGGLDELMELDETGRLGRILNATRVERGVGRQGCGGCGGARFVPCFDCGGSCKLVSSVGGEIERCPKCNENGLVHCPACI* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0538 376 Coils Coil 181 208 - -
Tpr3g0538 376 CDD GRX_GRX_like 224 372 - -
Tpr3g0538 376 MobiDBLite consensus disorder prediction 86 107 - -
Tpr3g0538 376 ProSiteProfiles Glutaredoxin domain profile. 213 323 - -
Tpr3g0538 376 SUPERFAMILY Thioredoxin-like 221 317 IPR036249 -
Tpr3g0538 376 MobiDBLite consensus disorder prediction 86 156 - -
Tpr3g0538 376 Pfam Glutaredoxin 225 296 IPR002109 -
Tpr3g0538 376 MobiDBLite consensus disorder prediction 116 136 - -
Tpr3g0538 376 Gene3D Glutaredoxin 223 323 - -
Tpr3g0538 376 PANTHER F1N19.7 1 375 - -
Tpr3g0538 376 MobiDBLite consensus disorder prediction 137 152 - -
Tpr3g0538 376 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 1 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0538 Tpr-Chr3 5408650 5410969 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0538 K17479 - gmx:100809536 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0538 3 5408650 5410969 Tpr3g0538 3 5408650 5410969 ECH