Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0535 ATGGCATTCTCTTCACTCACTTCAATTCCTCTTTCATCTTCTTCTTCTCTATACGCTCCTTCTATTTCTTCTCCATTTCGCGCATTTCCTCAATCAAACTTTCACCTAAAGAGGAACAACAACTATTCCAACTTCTCCCTTAAAGCACAAACCCTAAACTTTACTGGTTCCTTCTTTGAAGGTGGATTGGGTTCTGATGATGATGATGATGACGACGACGATGATGATGATGTTGTTATTCCAGGGTTTGCTGATCTTGAAGAAAGAGAAGAACCCGAATGCCCGCCCGGACTCAGACCGTACGAAACCATGGTGGTTCTGAGGCCTGACATGTCTGAGGATGAACGTCTTGCATTCACCCAGAAATATGAAGAGCTTCTTGTTGCTGGAGGTGGCATGTATGTAGAGGTTTTTAACAGAGGTGTTATTCCACTAGCATATAGCATCCAGAAGAAAAACAAGGAAGGAGAGACCAACACCTATATGGATGGCATCTACCTCCTATTCACCTACTTCACGAAGCCAGAGTCCATAGCCGTTCTTGAAGATACACTATTGAGGGATGATAATGTTATCCGATCAACGAGCTTTAAAATCAGGAAAAGGAGAGATTAG 615 0.4276 MAFSSLTSIPLSSSSSLYAPSISSPFRAFPQSNFHLKRNNNYSNFSLKAQTLNFTGSFFEGGLGSDDDDDDDDDDDDVVIPGFADLEEREEPECPPGLRPYETMVVLRPDMSEDERLAFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIQKKNKEGETNTYMDGIYLLFTYFTKPESIAVLEDTLLRDDNVIRSTSFKIRKRRD* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0535 204 CDD bS6_chloro_cyano 98 199 - -
Tpr3g0535 204 Pfam Ribosomal protein S6 101 198 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tpr3g0535 204 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 13 203 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tpr3g0535 204 Hamap 30S ribosomal protein S6 [rpsF]. 98 201 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tpr3g0535 204 Gene3D - 98 204 IPR014717 -
Tpr3g0535 204 PANTHER 30S RIBOSOMAL PROTEIN S6 ALPHA, CHLOROPLASTIC 13 203 - -
Tpr3g0535 204 SUPERFAMILY Ribosomal protein S6 98 201 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0535 K02990 - gmx:100500072 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0535 3 5383721 5386087 Tpr3g0535 3 5383721 5386087 ECH