Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0529 ATGGCGATCTCATCACAATCCTTCTCACCTTCCTTCATCTCAACACCCAACGATTTAACTCGCCCAACTCGTCTTCCATCCCGAGTCACCACTCACTTCCGCAAAACCCAAACCCGTTCTCCAGCTCTCCGATTCACCGTTTCTTCACGTCTCAACTCATCTAAATCCTCCGATGCCGGCGGTTCATTTTCCCCCGACAACGGCGATGTTCAATACGAGCTTCATCACGATCTTTCACCGCAGCGTCGGAGACATGGATCGCCGGTGTTTGTTACACTTCCGGTGAAATCTGTTGGGAAAGAGGGGAAAATTTGGAGGCCGAAAGCGATGATGTTGTCGTTGAAAGCTCTGGCTGCTGCTGGTGTGGAAGGTGTTGTTGTGGAGATTTGGTGGGGTGTGGTTGAAAGGAATGAACCTAGGGTTTATGATTGGAGAGGTTATCGTGAACTTGTTATGATGGCTTGCATGTGTGGGCTTAAAGTTCGAGCTGTTCTTGCGTTTCATCAACATGGAATTGATGGTGATGATCTTAATGGGATACCACTCCCTCAATGGGTGCTTGATGAGATACATACAGACCCGGATTTAGCATTTTCTGATAGGTTTGGAAGAAGAAATTTTGAGTACATTTCCCTCGGGTGTGATATTCTTCCTGTGCTGCGTGGACGTTCTCCCATTCAAGCATATGCAGATTTTATGAGGGACTTCAGGGACACCTTTAGGCCTTATCTTGGCATTATCATTACAGGAGTGCAGATTGGCATGGGTCCTGGTGGTGAATTAAGATATCCTTCATTGTCTTCCCAAAAGCTAAATTTGGCTTGGTCTCGTGAACTTGGAGAGTTTCAGTGCTATGATAAGTACATGCTTGCTTCTCTAAATGCCTCTGCTAGAAATATTGGAAAGCGTGAATGGGGAAATGGCGGTCCTTTTGGCACTGGAAGTTTGATGCAGAATCCCGAGCGTACTGAATTCTTTAGAAACGAGGGTGGCTCTTGGAATGCACCATATGGTAAATTTTTCCTTGAATGGTACTCGGATTTGCTGCTACGGCATGGAGAGCGAATTTGTAGGGAAGCTGAAACTATATTTAGGGGTTCAGAAGTCCACATATCAGCAAAATTGGCAGCCATTCACTGGCACTATGATACACAATCCCATCCATCGGAGTTAACAGCAGGCTATTATAATACTTTTAACAGGGATGGATACTTACCAATTTTACGCATGTTTAGTAAATATGGATTCACGATGTGCTGCTCTTGTTTTGAAATGCAAGATGTAATTATGAAGAAGATCAACCCAGATAGTAGCCCTGAAGGTTTTCTTAGACAACTTTTGCTGGCTGCTAGGCTCTGTGACGTATCACTTGAAGGTCAGAATTTTTCAACTGATTTGGATGATGGCGCATTCACTCAGGTGCTGGAGATGTCAAAATTTTACTCAAATGGGATTGAGAGACGGCCCTTTTCATTCAACTTTGTAAGAATGGACAAAAATATGTTTGAACCTCGAAGTTGGGACCGGTTTACTCGATTTGTGAGACGAATGTCCGATGGAAACATGCTTCGAGCCAGATTAAACCTACGGTTGAAAACTGCAGTGGCTGCAGAAGTTGGATTGTTATACCAGCTATACCAGTACTCTTGA 1650 0.4436 MAISSQSFSPSFISTPNDLTRPTRLPSRVTTHFRKTQTRSPALRFTVSSRLNSSKSSDAGGSFSPDNGDVQYELHHDLSPQRRRHGSPVFVTLPVKSVGKEGKIWRPKAMMLSLKALAAAGVEGVVVEIWWGVVERNEPRVYDWRGYRELVMMACMCGLKVRAVLAFHQHGIDGDDLNGIPLPQWVLDEIHTDPDLAFSDRFGRRNFEYISLGCDILPVLRGRSPIQAYADFMRDFRDTFRPYLGIIITGVQIGMGPGGELRYPSLSSQKLNLAWSRELGEFQCYDKYMLASLNASARNIGKREWGNGGPFGTGSLMQNPERTEFFRNEGGSWNAPYGKFFLEWYSDLLLRHGERICREAETIFRGSEVHISAKLAAIHWHYDTQSHPSELTAGYYNTFNRDGYLPILRMFSKYGFTMCCSCFEMQDVIMKKINPDSSPEGFLRQLLLAARLCDVSLEGQNFSTDLDDGAFTQVLEMSKFYSNGIERRPFSFNFVRMDKNMFEPRSWDRFTRFVRRMSDGNMLRARLNLRLKTAVAAEVGLLYQLYQYS* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0529 549 PANTHER BETA-AMYLASE 29 532 - -
Tpr3g0529 549 SUPERFAMILY (Trans)glycosidases 85 532 IPR017853 -
Tpr3g0529 549 Gene3D Glycosidases 79 539 - -
Tpr3g0529 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 121 135 IPR001554 GO:0000272|GO:0016161
Tpr3g0529 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 142 160 IPR001554 GO:0000272|GO:0016161
Tpr3g0529 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 164 185 IPR001554 GO:0000272|GO:0016161
Tpr3g0529 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 256 278 IPR001554 GO:0000272|GO:0016161
Tpr3g0529 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 333 352 IPR001554 GO:0000272|GO:0016161
Tpr3g0529 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 369 385 IPR001554 GO:0000272|GO:0016161
Tpr3g0529 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 386 397 IPR001554 GO:0000272|GO:0016161
Tpr3g0529 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 404 427 IPR001554 GO:0000272|GO:0016161
Tpr3g0529 549 MobiDBLite consensus disorder prediction 1 64 - -
Tpr3g0529 549 PANTHER - 29 532 IPR001554 GO:0000272|GO:0016161
Tpr3g0529 549 MobiDBLite consensus disorder prediction 1 65 - -
Tpr3g0529 549 Pfam Glycosyl hydrolase family 14 90 513 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0529 Tpr-Chr3 5342048 5345642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0529 36 542 Glycoside Hydrolase AT4G17090 45.703 1.30e-153 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0529 K01177 - gmx:100805981 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0529 3 5342048 5345642 Tpr3g0529 3 5342048 5345642 ECH