Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0526 ATGAGGCTTTTGAATGTGGCTACTTGCAACCTGAATCAATGGTCTATGGACTTTGATTCCAACACTAAGCAAATCAAAGAATCCATCTCCAAAGCCAAACAAGTCGGCGCCGTCATCAGACTTGGACCCGAGCTCGAGATTCCCGGTTGTGGCTGTGAAGATCACTTCTTAGAGCTCGACACTATTAACCATTCATGGGAATGTTTGAAAGATATATTGGTTGGTGATTGGACAGATAACATAGTGTGTAGTATTGGAATGCCTATTATCAAAGGTTCTGAGAGATATAATTGTCAAGTTTTATGTTTTAATCGAAAGATTATTATGATAAGACCCAAAATGTGGCTTGCAAATGATGGTAATTATAGAGAACTTCGATGGTTTACTGCATGGAAACAAAGGGATCAACTTGATGATTTTCAGCTTCCACCTCAAATTTCCGAGGCATTGGGCCAAAAGTCAGTTCCATTTGGTTATGGATACGTCAAGTTTCAAGACACTGCTATTGCAGCTGAAGTCTGTGAAGAGCTTTTTACACCATCACCCCCTCACGCTGAGCTTGCATTAAATGGAGTTGAAGTGTTTATGAATGCAAGTGGTAGTCATCACCAACTTAGAAAGCTTGATGTTCGTCTTCGTGCTTTAATAAATGCCACTCAATCTTGTGGAGGGGTCTATATGTATAGTAATCAACAAGGTTGCGATGGTGGTCGCCTTTACTATGATGGATGTGCTAGCGTTGTCGTAAATGGTGATGTTGTTGCACAAGGTTCCCAATTTTCATTAAATGATGTTCAAGTTGTGGTTGCTCAGATAGATCTCGATCTGGTTGCGAGCCTTAGAGGATCTTTAAGCAGTTTCCAAGAGCAAGCAAGTTGTAAAGCCAAGGTTCCTTCGGTAGATGTACCATACAGTCTATGTCTTCCTTTTGATCTTAAAAACATACGCCTTTCCGTTCCACTTCAGATAAAATATCACTCTCCCGCGGAGGAAATAGCATATGGACCTGGTTGCTGGTTATGGGACTATTTACGAAGAAGCGGAGCAACTGGTTTTCTCCTCCCACTTTCTGGTGGAGCAGACAGTTCTTCTGTTGCTGCAATTGTTGGATGCATGTGTCAGCTGGTTGTGAAAGAAATTGCAAATGGAGATGAACAAGTTAAAGCTGATGCAATACGAATCGGAAACTATAAGAATGGAGAATATCCTACAGACAGCAGAGAATTTGCTAAGCGAATATTTTATACTGTCTTTATGGGATCTGAAAACAGTTCGGGAGAGACAAGGTCGCGAGCTAAGGTGTTGGCAGATGAAATTGGTTCATGGCACCTTAATGTTAGCATTGATGGAATGATATCTTCTCTTTTGTCATTATTCCAAAAAATTACCGGAAAGCGACCAAACTACAAGGTAGATGGTGGATCTGATGTTGAGAATTTAAGCTTGCAAGACATTCAAGCTCGAATCCGAATGGTGCTGGCTTTCATGTTAGCAACACTCTTGCCTTGGGTTAACAACAAACCTGGGATTTATCTTGTCTTGGGGAGCTCCAATGTCGATGAAGGGTTGCGCGGCTACTTAACAAAGTATGATTGCAGCTCAGCAGATATAAATCCTATTGGTAGTTTAAATAAGCAGGATATTCGGGAATTCTTGCGATGGGCAGCCATCCATCTTGGTTACTCATCTTTGGCAGATATTGAAGCCGCTCCACCCACAGCTGAACTCGAGCCTATACGTTCTGACTACATTCTGACTGATGAAGATGACATGGGAATGACTTATGAGGAACTATCGGCTTATGGAAGACTACGGAAAGTATTTCGTTGTGGTCCACTTTCCATGTTTCAGAATCTATGTTCCACATGGAGTGCAAGATTGACTCCATCACAAGTGGCTGAAAAAGTAAAACACTTCTTCAAGTTTTATGCTATAACTCGACACAATATGACTACCTTGACACCTTCCTATCATGCCGGGAGTTATTCACCAGATGATAATAGGTTCGATCTTCGCCAGTTTCTCTATAATACAAGTTGGCCATATCAATTTCGAAAAATCGATGAACTAGTACATGAGCTGGATGTCAAAGATGTTCAAGGAAACCATGAGGCATTGGCAGCTGCATCAAATGGTGTCAGTGGGAAGAAAGTTGCTGCATCAAATGGTGTGATCAGTTGGATGGGAATTTCTGCATGA 2199 0.4147 MRLLNVATCNLNQWSMDFDSNTKQIKESISKAKQVGAVIRLGPELEIPGCGCEDHFLELDTINHSWECLKDILVGDWTDNIVCSIGMPIIKGSERYNCQVLCFNRKIIMIRPKMWLANDGNYRELRWFTAWKQRDQLDDFQLPPQISEALGQKSVPFGYGYVKFQDTAIAAEVCEELFTPSPPHAELALNGVEVFMNASGSHHQLRKLDVRLRALINATQSCGGVYMYSNQQGCDGGRLYYDGCASVVVNGDVVAQGSQFSLNDVQVVVAQIDLDLVASLRGSLSSFQEQASCKAKVPSVDVPYSLCLPFDLKNIRLSVPLQIKYHSPAEEIAYGPGCWLWDYLRRSGATGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGNYKNGEYPTDSREFAKRIFYTVFMGSENSSGETRSRAKVLADEIGSWHLNVSIDGMISSLLSLFQKITGKRPNYKVDGGSDVENLSLQDIQARIRMVLAFMLATLLPWVNNKPGIYLVLGSSNVDEGLRGYLTKYDCSSADINPIGSLNKQDIREFLRWAAIHLGYSSLADIEAAPPTAELEPIRSDYILTDEDDMGMTYEELSAYGRLRKVFRCGPLSMFQNLCSTWSARLTPSQVAEKVKHFFKFYAITRHNMTTLTPSYHAGSYSPDDNRFDLRQFLYNTSWPYQFRKIDELVHELDVKDVQGNHEALAAASNGVSGKKVAASNGVISWMGISA* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0526 732 Gene3D - 1 305 IPR036526 -
Tpr3g0526 732 PIRSF NADS_GAT 1 683 IPR014445 GO:0003952|GO:0005524|GO:0009435
Tpr3g0526 732 Hamap Glutamine-dependent NAD(+) synthetase [nadE]. 4 681 IPR014445 GO:0003952|GO:0005524|GO:0009435
Tpr3g0526 732 Pfam NAD synthase 339 601 IPR022310 -
Tpr3g0526 732 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 321 662 - -
Tpr3g0526 732 Gene3D HUPs 328 696 IPR014729 -
Tpr3g0526 732 PANTHER NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE 1 705 IPR003694 GO:0003952|GO:0004359|GO:0005737|GO:0009435
Tpr3g0526 732 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 4 274 IPR003010 GO:0006807
Tpr3g0526 732 CDD GAT_Gln-NAD-synth 6 292 - -
Tpr3g0526 732 CDD NAD_synthase 327 648 IPR003694 GO:0003952|GO:0004359|GO:0005737|GO:0009435
Tpr3g0526 732 TIGRFAM nadE: NAD+ synthetase 412 601 IPR003694 GO:0003952|GO:0004359|GO:0005737|GO:0009435
Tpr3g0526 732 Pfam Carbon-nitrogen hydrolase 6 281 IPR003010 GO:0006807
Tpr3g0526 732 PANTHER GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE 1 705 - -
Tpr3g0526 732 SUPERFAMILY Carbon-nitrogen hydrolase 1 289 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0526 Tpr-Chr3 5317239 5326603 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0526 K01950 - gmx:100804904 1264.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0526 3 5317239 5326603 Tpr3g0526 3 5317239 5326603 ECH