Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0455 ATGGCTACTGGGTTCAGTTTCAACCTCGTCTTTTCAACTTCATTGTTCCTCCTTCTTCTAGATTGTTGCAATGGTAGTTTCATTGGGATATGCTATGGAAGAAATGCCGACGACTTACCGACACCCGACAAGGTGGCACAGTTAGTTCAACTTCATAAAATGAAATATGTCAGGATTTATGATTCTAATGCACAAGTCCTAAAGGCCTTTGCAAAAACTGGAGTTGAACTTATGATTGGTGTTCCAAATTCAGATTTGCTCTCATTATCCCAATATCAATCTAATGCAGACAATTGGTTGAAAAACAGTGTCCTTCCTTATTATCCGGCCACAAAGATCACATACATAACTGTTGGTGCTGAAGTCACTGAAAGTTCCTATAATACCTCTTCATTGGTAGTGCCTGCCATGACTAATGTACTAACAGCACTCAAAAAACTAGGACTGCACAAAAAGATAAAAGTTTCGAGTACTCATTCGCTTGGTGTTCTCTCGCGATCATTCCCGCCTTCAGCTGGTGCTTTCAATAGTAGCCATGCACATTTCCTGAAGCCAATGCTAGAATTTCTCGCCGAAAATCAATCGCCTTTTATGATTGATATATATCCTTATTATGCTTACCGAGATTCACCGAATAAAGTGTCTTTAGACTATGCACTTTTTCAGGCTTCCTCTGAAGTTATTGATCCAAATACTGGTTTGTTGTACACAAACATGTTTGATGCACAGATTGATGCTATTTACTATGCACTCATGGCTCTAAATTTTAGAACAATTAAGGTCATGGTCACCGAAACAGGTTGGCCTTCAAAAGGGTCGCCTAAGGAAAAGGCTGCAACTCCTGATAATGCACAGACATATAATACCAATCTCATAAGGCATGTTATTAATAATACCGGTACTCCTGCGAAGCCGGGGCAGGAGCTAGATGTTTACATTTTCTCACTGTTTAATGAAAATAGGAAGCCCGGTTTAGAATCAGAGAGGAACTGGGGATTATTTTATCCAGATCAGACAAGTGTGTATAATCTAGATTTTACCGGACGGGGTGGTGTTGATATGACTACAGCTGCGAATGTAACCCGGTCAAATAGAACATCATGGTGCATTGCTTCTAGCAAAGCCAAAGAAATTGATTTGCAGAATGCTTTGGATTGGGCATGTGGTCCTGGCAATGTGGACTGTACTGCTATCCAGCCTAGCCAGCCTTGTTTCGAGCCGGATAATCTAGCTTCACACGCATCTTTTGCTTTTAATAGCTATTATCAGCAAAATGGGGCCTCTGATGTTGCTTGTAGTTTTGGCGGTACAGGTGTAAAAGTCGACAAGGATCCAAGTTATGACAACTGCATCTACATGAGAGATGGCAATAATAAAACTTCAGGTGGTAATGCAAGGGCGATGTCGTCAACTTCATCCTCTCAACGGGAAGGAAGATATTCAATTTCTATCTATCTTCTTTTAACTTGTCTCTTCATTATACTGAATATTCAACAATCCTGA 1503 0.4039 MATGFSFNLVFSTSLFLLLLDCCNGSFIGICYGRNADDLPTPDKVAQLVQLHKMKYVRIYDSNAQVLKAFAKTGVELMIGVPNSDLLSLSQYQSNADNWLKNSVLPYYPATKITYITVGAEVTESSYNTSSLVVPAMTNVLTALKKLGLHKKIKVSSTHSLGVLSRSFPPSAGAFNSSHAHFLKPMLEFLAENQSPFMIDIYPYYAYRDSPNKVSLDYALFQASSEVIDPNTGLLYTNMFDAQIDAIYYALMALNFRTIKVMVTETGWPSKGSPKEKAATPDNAQTYNTNLIRHVINNTGTPAKPGQELDVYIFSLFNENRKPGLESERNWGLFYPDQTSVYNLDFTGRGGVDMTTAANVTRSNRTSWCIASSKAKEIDLQNALDWACGPGNVDCTAIQPSQPCFEPDNLASHASFAFNSYYQQNGASDVACSFGGTGVKVDKDPSYDNCIYMRDGNNKTSGGNARAMSSTSSSQREGRYSISIYLLLTCLFIILNIQQS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0455 500 SUPERFAMILY (Trans)glycosidases 28 346 IPR017853 -
Tpr3g0455 500 ProSitePatterns Glycosyl hydrolases family 17 signature. 259 272 IPR000490 GO:0004553|GO:0005975
Tpr3g0455 500 Gene3D Glycosidases 27 351 - -
Tpr3g0455 500 Gene3D - 362 464 - -
Tpr3g0455 500 Pfam X8 domain 368 438 IPR012946 -
Tpr3g0455 500 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 13 8 468 - -
Tpr3g0455 500 SMART X8_cls 367 452 IPR012946 -
Tpr3g0455 500 Pfam Glycosyl hydrolases family 17 28 346 IPR000490 GO:0004553|GO:0005975
Tpr3g0455 500 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 468 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0455 Tpr-Chr3 4693653 4696651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0455 21 495 Glycoside Hydrolase AT5G56590 72.176 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0455 - - gmx:100794295 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0455 3 4693653 4696651 Tpr3g0455 3 4693653 4696651 ECH