Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0373 ATGGCGCTGGCACTACCCTCATTCTCCTCTTTCAACACCAACCGCTTCATTGTTCGTTCCAATTCCGATTCTTATAACTCTGACGGAATCCAACGCCGTTGGATTGAAGCACCATTCGATCGTTGTTCCCTCGCATCTCAACACAGATTCACCGTAGCGTCGTATAACATACTTGCAGATCGAAATGCTTCTCAACACGCTGATTTATATGTTAACATTCCTTCTCGTTACATCAATTGGGATCGTCGTCAAAAAATTCTCTCCGACGAACTCTTTCAATGGAATCCTGATATTATCTGTTTACAAGAGGTGGACAAGTATTTTGAACTCTCCAATATTTTGGTTAAAGCCGGATATGCAGGATCTTATAAGAGACGCACCGGAGATACATCTGACGGTTGTGCAATGTTTTGGAAAGCTGATAAGTTCCAGGTATTAGATGAAGAGAGTATTCAATATAAGGACATTGGTCTTCGTGATAATGTTGCTCAACTTCTAGTTTTTGAGATGCATGGATCTGACTCAAGAAGACTAGTGGTTGGTAACATCCACATACTTTATAACCCAAACAGGGGAGAAGTTAAATTAGGCCAAATTCGTTTTCTCTCATCAAAAGCACAGACCCTTTCAGAGAAATGGGGTAATGCACCTGTAATCCTAGCTGGTGATTTTAATAGTACTCCTGAGAGTGGAATATACAAGTTTTTGTCATCATCTGAGCTTAATATCAAGCTATATGACAGAAAGGAGTTATCTGGACAGAAACGATGTCGTCCTGCTCAAGTTTTAGGCGAGAAAAAAGAAACAGTTGGTCCATTTAATTTACTCGATGGATTGTTGGACTGCTGGACAGATGAAGAGGTGAAAACTGCAACGGGTGATTCTAAGTGTCACTTGGCTGTGCATCCATTGAAGTTGAATAGTTCGTATGCCACAGTCAATGGTTCAGCTAGTACACGGGGATTCAATGGTGAACCCTTGGCAACTTCCTATCACTCAAAGTTTCTCGGTACTGTAGATTACTTATGGTACTCTGATGGTATTTTACCTACAAGAGTTCTTGATACTGTTTCAATTAGCGATCTACTGAGGGTAGGCGGTCTCCCATGCAAGAAAGTAGGAAGCGACCATTTGGCCTTGGTGTCTGAATTTTCCTTTTCAGTTGCTCATAATAAATCTACAGACATAGATGCAGCAACAGCATCACCTAGAGTAGATATTGAAGAGCATGACCATCTGCAGTCTTAG 1248 0.4119 MALALPSFSSFNTNRFIVRSNSDSYNSDGIQRRWIEAPFDRCSLASQHRFTVASYNILADRNASQHADLYVNIPSRYINWDRRQKILSDELFQWNPDIICLQEVDKYFELSNILVKAGYAGSYKRRTGDTSDGCAMFWKADKFQVLDEESIQYKDIGLRDNVAQLLVFEMHGSDSRRLVVGNIHILYNPNRGEVKLGQIRFLSSKAQTLSEKWGNAPVILAGDFNSTPESGIYKFLSSSELNIKLYDRKELSGQKRCRPAQVLGEKKETVGPFNLLDGLLDCWTDEEVKTATGDSKCHLAVHPLKLNSSYATVNGSASTRGFNGEPLATSYHSKFLGTVDYLWYSDGILPTRVLDTVSISDLLRVGGLPCKKVGSDHLALVSEFSFSVAHNKSTDIDAATASPRVDIEEHDHLQS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0373 415 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 25 388 - -
Tpr3g0373 415 Pfam Endonuclease/Exonuclease/phosphatase family 53 377 IPR005135 GO:0003824
Tpr3g0373 415 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 25 388 - -
Tpr3g0373 415 SUPERFAMILY DNase I-like 33 388 IPR036691 -
Tpr3g0373 415 Gene3D Endonuclease/exonuclease/phosphatase 23 400 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0373 Tpr-Chr3 4023061 4027450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0373 43 238 EF-hand Containing Proteins AT5G54130 28.037 2.56e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0373 - - gmx:100779393 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0373 3 4023061 4027450 Tpr3g0373 3 4023061 4027450 ECH