Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0372 ATGAACATTGGATCTTGTTCAATGTCACGCTTCCAATTTCCAATCAGGCTCTTAACAAAACCCTTAATCTCAATGCGTTACAATAAGTCTTTTTTATCTCTTCAAAATTCTTCAGCTTCATCCATAACCACCACCACCACCACAGAGCTCACAAAATCGAAGCAGAATGAACCTTGGTTAATTGTTGGCCTCGGTAATCCTGGCAAAACATTCTCTGGTACACGCCACAATGTGGGATTTGAGATGGTTGATACTATAGCTCAAGCAGAAGGGATATCTATGAAAAGTGTTTCCTTCAAAGCTCTATTTGGAAAAGGTTACATAGGTGATGTGCCAGTTATACTTGCAAAGCCACAGACTTTTATGAATTTAAGTGGTGAATCTGTTGGAGCCATAGTTTCATATTACAAGATTCCATTGAAGCAAGTGCTTGTGATCTTTGACGACTTGGATTTGCCATTTGCTAAATTGCGGCTGCTACCAAAGGGTGGGCATGGAGGTCAGAATGGAATGAAGAGTATTATTAATCACTTGAAAGGGAATTCTGCTTTTCCTCGCTTAAGAATTGGCATTGGACGACCTCCTGGGAAAATGGATCCTGCAGCATTTGTTCTTCGATCTTTCACTAAACAGGAAAGGGAAGAACTCGATTTTACTTTACACCGTGGATTAGAAGCCGTGCGGATTATTTTGTTGGAGGGGTTTGATAAAGGTGCAACATTTGTTAATAGTGCCAAAAAGATAGAACAAATAGGCTGA 759 0.4005 MNIGSCSMSRFQFPIRLLTKPLISMRYNKSFLSLQNSSASSITTTTTTELTKSKQNEPWLIVGLGNPGKTFSGTRHNVGFEMVDTIAQAEGISMKSVSFKALFGKGYIGDVPVILAKPQTFMNLSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGQNGMKSIINHLKGNSAFPRLRIGIGRPPGKMDPAAFVLRSFTKQEREELDFTLHRGLEAVRIILLEGFDKGATFVNSAKKIEQIG* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0372 252 TIGRFAM pth: aminoacyl-tRNA hydrolase 60 237 IPR001328 GO:0004045
Tpr3g0372 252 Pfam Peptidyl-tRNA hydrolase 60 237 IPR001328 GO:0004045
Tpr3g0372 252 PANTHER PEPTIDYL-TRNA HYDROLASE CHLOROPLASTIC 36 246 - -
Tpr3g0372 252 SUPERFAMILY Peptidyl-tRNA hydrolase-like 58 243 IPR036416 GO:0004045
Tpr3g0372 252 Hamap Peptidyl-tRNA hydrolase [pth]. 58 236 IPR001328 GO:0004045
Tpr3g0372 252 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 71 84 IPR018171 GO:0004045
Tpr3g0372 252 Gene3D - 43 245 IPR036416 GO:0004045
Tpr3g0372 252 PANTHER PEPTIDYL-TRNA HYDROLASE 36 246 IPR001328 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0372 Tpr-Chr3 4014042 4017224 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0372 K01056 - gmx:100526866 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0372 3 4014042 4017224 Tpr3g0372 3 4014042 4017224 ECH