Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0369 ATGTCTCCAATCTTCGAATACTTCGTAGTGTGCGGGATCGGACCAGAGATTCGATCCATTGATGGAACCAAAGGTTACCATGGTCCTGGTTGGATGTATCTTCCTTCTCTTCTCGATCAATATCCACCTTCTACTCACACTCTTTACCCTCCTGCACCTCCTCAGCTTCCAACTTGTGTTCTACCGGCTGGTGTTGTGTTTTATTCGTCAGGATTTGATCCTAATGATCCTTCCACTTTTCCGCGGAGTTATCCAATTGTTTTGACCGAGGGTGATGGTTCAAAAATCTATGTGAGCTGCATTTCTTTCCGGGATCCTGTTTGTGAAGATATTCTGGAGGCCTACAGGATACAGGGGAATTCCTATGCTGACAAATGCATCTGTCTAGTTTCACGCTCGCCTAGTTTCAGTGTGCTAAGGAGTGCCCTAGAGGAACTGTTTGTTCTATGTTTCTCGCCAACTGGAAGTAGCAAGCCACTATGGGATATTATAGCACATATGGTGTCCAATGTACCTTTACCTAATCCTGGAAAGGAGCGAGTTCTGTTTGCTATTGAGAATCGTCTGCTTTCTGTAGAGGCTCCACCAAACTATGGACTTCCCCATGTTGATATATCATTCCAGCCTCTGGTACAGTGTTTAGATGTTGACAACTTCATAAGACTTTTTACGGCAGTGCTGCTTGAGAGGAGGATTTTACTTCGGGCAAACAAATATTCACTTCTAACTCTTGCATCAGAGGCCATTTGTCACCTAATCTACCCATTCCGATGGCAGCATGTATACATTCCATTGCTGTTTTACAGCGGAGTAGATTATATTGATGCTCCTACACCATATATGATGGGACTCCATTCTGGTGTTGATACCACTGGGCTAACAATGGATGGTGTAGTTGTTGTGGACCTTGAGTATAATCGTATCACTACATCAGAGGAAATTCCACCTATTCCTGAACCAGAATTCAGCTTTTTGCGTGGTGAGATCACAAAGTTAATACATCCCAATGTAATTGGAATTGATGAAATGAAGACTGGAATATATAGTGTATCTGAGCACTTTCCTAAACTTAGGGCTAAGCAATGGGGAGAAGAACACAACCTTCAGCTAAGGATGATATTCCTAAAGTTCTTTGCAACATTTTTAAGTGGTTACCGCAATTTTCTAGAAAATAGTGCTACTCAGGTCTTCAACAACCAAGCTTTTTTGAAGAAGCGGTCTCGATCTACCAACCAACCGTCAGAGCCCATGATAGCTCAGTTTCTTGAATCCCAAGGTTTCTTGGATTATTTGGAGAGAGGGGTAGGTTTTGATGAAAACAACAATACTGTTCTTGATAAGCTGCAAGATGCAATTGGAAGGGGTCAAAACCCTATGTCAGTTTTTCCTTCATCCGTGGTAGAGCCTGAGATTATAACGGTATCAGATTCTGCTGTTGGAATATCAGGGTCTAGTGCCAAATATACTCATGATAGATTTCCGTCAAACATCAGAACTGAAGAGCAAGAAGAAAAGAGGAAACAGATTCTTTCAACCGTTAGTAATGCCTTTGAGTACTCTGGAAGGCATACTCCAAGCAAGGATCCTTTAGCAGACAATCTTACTCCACAAGAGAGAGCTGCTGAAAGGGACCTTATGGTACTGGACATTCAGGTTAAGCTGCAGGGTTTATGGTTGCGGCTTCTTCAATTGGAAACTACAGATGATCCTCTCTCATCCTTTGAATATGGAACAATACTTGCTTTGATTGAATCTGATGCAGAGGGAATTGGTGGCAGTGGATTTGTTGAATGTATAAGGGAGCATATGCATTCGGTTAGTAGTTTTACCGATAATTTAATAATTTATTATTTCTTTTTCTGGGGTAAGAAAGCTTCTGCTGGACCTTTTTTATTCTATCAGGGTTGGCATTGTCAGCTCACTGAGGAACAGTTTATTGCAGTGAAAGAGTTGCTCAAAACAGCTATCAATCGTGCAACATCACGAAGTGACTGGTTGACCATTAGAGATGCTCTTGAGGTTTCTTCTGATATGTATAAGAAAGACAATAATAATGTGCCCGACTATGTCCAACGTCATCTTATTTCTCTATCTATTTGGGAGGAGCTACGGTTTTGGGAAGGATATTTTGACCATTTAATGGAGCAAGCTCCAAATGAGTCAGCCAACTACGCATCTCTGGCGACTGCACAGCTTGTTGTGTTGGCTTCACACATGGCTGGGCTAGGACTTCCTGACTATGATGCTTGGTACATGATCGAAACAATTGCAGAGAGGAACAACGTCGGATCCAAACAATTTATAAAAATCAGAGGATTCTTATCCCATATCCAACAACTACGTAATGGGTACTGGGGATTCACCTCAATGAAGGCACAGTCTTCCCTATCACTTGCATTGACATCCCCACATTCAAAAAACACCAAAGATGAGGATCAGCAACCAACTGAGGGAACCGGTGTTGGTAGAAGCTGGGTGCATAGTATGTTCAGCCGAAGCACAACATCTAGATCCAGCTCATTTAGTCGTGTTCGTAGATGGACGTCTGATGGAGGCAATTCAGCCACCAATGAGAATGGGACTCCTCGCAAACAAGATTCATCAATTGGGGGGCAGAAGAAGCTTCAAACAAATGTTCGCATGCTTAGGGGTCATAATGGTGCCATTACTGCTCTCCACTGTGTTACAAAGAGAGAAGTGTGGGATTTGGTGGGTGACCGTGAAGATGCTGGTTTCTTTATTAGTGGAAGTACAGACTGCTCAATTAAGATATGGGATCCAAGTCTTCGTGGTTCTGAACTCAGGGCAACTTTAAAAGGGCATACAAGGACTGTCCGTGCCATAAGTTCAGACAGGGGGAAAGTGGTGTCAGGTTCTGATGATCAGTCTGTTTTGGTTTGGGACAAGCAGACGACTCAACTTTTAGAAGAGCTTAAAGGCCATGACGGACCGGTCAGCTGTGTACGCACGCTCTCTGGTGAGCGTGTGCTAACTGCATCCCATGACGGCACTGTGAAGATGTGGGATGTAAGAACTGATAGATGTGTTGCAACTGTTGGTCGTTGCTCTAGTGCTGTTTTATGCATGGAATATGATGACAATGTGGGAATCTTAGCTGCGGCTGGAAGAGACGTGGATGCCAACATGTGGGACATTCGTGCAAGTAGGCAGATGCATAAACTTTCAGGACATACACAATGGATAAGGTCACTAAGAATGGTAGGTGACACTGTTATTACTGGTAGCGATGATTGGACGGCAAGAATATGGTCTGTTTCACGAGGAGCATGTGATGCTGTGCTAGCATGCCATGCCGGACCAATATTATGTGTTGAATATTCTTCATTAGATAGAGGAATAATAACAGGGTCAAGTGATGGCCTGCTGCGGTTTTGGGAAAATGATGATGGAGGTATAAGGTGTGCAAAAAATATAACAGTTCACAATGCTGCCATATTATCTATCAATGCTGGGGAGCACTGGTTAGGTATTGGAGCAGCTGATAATTCTCTTTCTCTTTTTCATCGGCCCCAAGAGAGACTTGGTAGTTTTTCTTCTGGCACCAGCGGGTCCAAGATGGCTGGTTGGCAGCTTTACAGAACACCACAAAAAACAGTTGCTATGGTAAGATGTATCGCTTCAGACCTGGAAAGGAAAAGGATATGCAGCGGGGGTCGTAATGGACTTCTAAGACTATGGGATGCAACCATCAATATTTGA 3720 0.4328 MSPIFEYFVVCGIGPEIRSIDGTKGYHGPGWMYLPSLLDQYPPSTHTLYPPAPPQLPTCVLPAGVVFYSSGFDPNDPSTFPRSYPIVLTEGDGSKIYVSCISFRDPVCEDILEAYRIQGNSYADKCICLVSRSPSFSVLRSALEELFVLCFSPTGSSKPLWDIIAHMVSNVPLPNPGKERVLFAIENRLLSVEAPPNYGLPHVDISFQPLVQCLDVDNFIRLFTAVLLERRILLRANKYSLLTLASEAICHLIYPFRWQHVYIPLLFYSGVDYIDAPTPYMMGLHSGVDTTGLTMDGVVVVDLEYNRITTSEEIPPIPEPEFSFLRGEITKLIHPNVIGIDEMKTGIYSVSEHFPKLRAKQWGEEHNLQLRMIFLKFFATFLSGYRNFLENSATQVFNNQAFLKKRSRSTNQPSEPMIAQFLESQGFLDYLERGVGFDENNNTVLDKLQDAIGRGQNPMSVFPSSVVEPEIITVSDSAVGISGSSAKYTHDRFPSNIRTEEQEEKRKQILSTVSNAFEYSGRHTPSKDPLADNLTPQERAAERDLMVLDIQVKLQGLWLRLLQLETTDDPLSSFEYGTILALIESDAEGIGGSGFVECIREHMHSVSSFTDNLIIYYFFFWGKKASAGPFLFYQGWHCQLTEEQFIAVKELLKTAINRATSRSDWLTIRDALEVSSDMYKKDNNNVPDYVQRHLISLSIWEELRFWEGYFDHLMEQAPNESANYASLATAQLVVLASHMAGLGLPDYDAWYMIETIAERNNVGSKQFIKIRGFLSHIQQLRNGYWGFTSMKAQSSLSLALTSPHSKNTKDEDQQPTEGTGVGRSWVHSMFSRSTTSRSSSFSRVRRWTSDGGNSATNENGTPRKQDSSIGGQKKLQTNVRMLRGHNGAITALHCVTKREVWDLVGDREDAGFFISGSTDCSIKIWDPSLRGSELRATLKGHTRTVRAISSDRGKVVSGSDDQSVLVWDKQTTQLLEELKGHDGPVSCVRTLSGERVLTASHDGTVKMWDVRTDRCVATVGRCSSAVLCMEYDDNVGILAAAGRDVDANMWDIRASRQMHKLSGHTQWIRSLRMVGDTVITGSDDWTARIWSVSRGACDAVLACHAGPILCVEYSSLDRGIITGSSDGLLRFWENDDGGIRCAKNITVHNAAILSINAGEHWLGIGAADNSLSLFHRPQERLGSFSSGTSGSKMAGWQLYRTPQKTVAMVRCIASDLERKRICSGGRNGLLRLWDATINI* 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0369 1239 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 978 1012 - -
Tpr3g0369 1239 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 938 968 - -
Tpr3g0369 1239 SMART uDENN_cls 1 104 IPR005113 -
Tpr3g0369 1239 Pfam WD domain, G-beta repeat 973 1009 IPR001680 GO:0005515
Tpr3g0369 1239 Pfam WD domain, G-beta repeat 1097 1132 IPR001680 GO:0005515
Tpr3g0369 1239 Pfam WD domain, G-beta repeat 878 926 IPR001680 GO:0005515
Tpr3g0369 1239 Pfam WD domain, G-beta repeat 1057 1091 IPR001680 GO:0005515
Tpr3g0369 1239 Pfam WD domain, G-beta repeat 936 968 IPR001680 GO:0005515
Tpr3g0369 1239 ProSiteProfiles Trp-Asp (WD) repeats profile. 1061 1100 IPR001680 GO:0005515
Tpr3g0369 1239 Gene3D - 1057 1239 IPR015943 GO:0005515
Tpr3g0369 1239 Gene3D - 838 1056 IPR015943 GO:0005515
Tpr3g0369 1239 PANTHER C-MYC PROMOTER BINDING PROTEIN 4 1239 - -
Tpr3g0369 1239 PANTHER DENN DOMAIN-CONTAINING PROTEIN 3 4 1239 - -
Tpr3g0369 1239 SMART dDENN_cls 366 434 IPR005112 -
Tpr3g0369 1239 ProSitePatterns Trp-Asp (WD) repeats signature. 1221 1235 IPR019775 -
Tpr3g0369 1239 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1101 1133 - -
Tpr3g0369 1239 Pfam DENN (AEX-3) domain 123 304 IPR001194 -
Tpr3g0369 1239 Pfam uDENN domain 35 103 IPR005113 -
Tpr3g0369 1239 Gene3D - 1 176 - -
Tpr3g0369 1239 SMART DENN_cls 122 306 IPR001194 -
Tpr3g0369 1239 ProSitePatterns Trp-Asp (WD) repeats signature. 996 1010 IPR019775 -
Tpr3g0369 1239 MobiDBLite consensus disorder prediction 798 825 - -
Tpr3g0369 1239 CDD WD40 878 1174 - -
Tpr3g0369 1239 Gene3D - 202 387 IPR043153 -
Tpr3g0369 1239 ProSiteProfiles Trp-Asp (WD) repeats profile. 908 926 IPR001680 GO:0005515
Tpr3g0369 1239 SUPERFAMILY WD40 repeat-like 879 1235 IPR036322 GO:0005515
Tpr3g0369 1239 SMART WD40_4 971 1009 IPR001680 GO:0005515
Tpr3g0369 1239 SMART WD40_4 1195 1234 IPR001680 GO:0005515
Tpr3g0369 1239 SMART WD40_4 1054 1091 IPR001680 GO:0005515
Tpr3g0369 1239 SMART WD40_4 1138 1175 IPR001680 GO:0005515
Tpr3g0369 1239 SMART WD40_4 1012 1051 IPR001680 GO:0005515
Tpr3g0369 1239 SMART WD40_4 875 926 IPR001680 GO:0005515
Tpr3g0369 1239 SMART WD40_4 1094 1133 IPR001680 GO:0005515
Tpr3g0369 1239 SMART WD40_4 931 968 IPR001680 GO:0005515
Tpr3g0369 1239 PRINTS G protein beta WD-40 repeat signature 955 969 IPR020472 -
Tpr3g0369 1239 PRINTS G protein beta WD-40 repeat signature 996 1010 IPR020472 -
Tpr3g0369 1239 PRINTS G protein beta WD-40 repeat signature 1078 1092 IPR020472 -
Tpr3g0369 1239 ProSiteProfiles Trp-Asp (WD) repeats profile. 1101 1133 IPR001680 GO:0005515
Tpr3g0369 1239 ProSiteProfiles Trp-Asp (WD) repeats profile. 938 977 IPR001680 GO:0005515
Tpr3g0369 1239 ProSiteProfiles Tripartite DENN domain profile. 18 442 IPR037516 -
Tpr3g0369 1239 MobiDBLite consensus disorder prediction 841 872 - -
Tpr3g0369 1239 ProSiteProfiles Trp-Asp (WD) repeats profile. 978 1018 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0369 Tpr-Chr3 3950488 3964702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0369 975 1190 Miscellaneous Gene Families AT5G08390 21.973 1.90e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0369 - - gmx:100818305 2160.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0369 3 3950488 3964702 Tpr3g0369 3 3950488 3964702 ECH