Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0333 ATGTATCAACAAGAGGATGGAAAGCCATTTAACAATCAGCAGCCACCATCAGCCGCCGCTACTGGTTTTCCGGTGAGCTTCAATAGCAATACATCAGCAACGTACTCCGGTGCTTCAACGACGGAATACGTGCCTCCTCCGCCGAAACCTCTAGTTGATTGGTCCACTGGTCTTTGTGATTGCTGCTCTAATCCTGGAAAAAGTTGCATAACGTTTTGGTGTCCATGTATTACTTTTGGCCAAGTTGCTGAAATAATTGACAAGGGATCTACTTCATGTGGTGCTAGTGGGGCTTTGTATACATTGATTTGTTGTGTGATTGGGTGTGGTTGCTTGTATTCTTGCTTCTACCGGTCAAAGATGAGACAACAATACGGTTTGAAAGGAAATGATTGTACAGATTGTATGATTCATTGTTGCTGTGAGGCTTGTGCCTTGTGTCAAGAATATCGTGAGCTTGAAAACCGTGGATTCAATATGGTCATTGGGTGGCATGGAAATGTTGAGCAACGGACTCGAGGAATAGCTATGGCTACAACAGCTCCAGCAGTCGAATCGGGCATGAACCGTTGA 573 0.4485 MYQQEDGKPFNNQQPPSAAATGFPVSFNSNTSATYSGASTTEYVPPPPKPLVDWSTGLCDCCSNPGKSCITFWCPCITFGQVAEIIDKGSTSCGASGALYTLICCVIGCGCLYSCFYRSKMRQQYGLKGNDCTDCMIHCCCEACALCQEYRELENRGFNMVIGWHGNVEQRTRGIAMATTAPAVESGMNR* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0333 190 PANTHER DUF614 FAMILY PROTEIN-RELATED 17 189 IPR006461 -
Tpr3g0333 190 Pfam PLAC8 family 54 152 IPR006461 -
Tpr3g0333 190 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 53 155 IPR006461 -
Tpr3g0333 190 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED 17 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0333 Tpr-Chr3 3615080 3616675 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0333 - - mtr:MTR_5g017650 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0333 3 3615080 3616675 Tpr3g0333 3 3615080 3616675 ECH