Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0330 ATGGAAGAAGGTGCAGAGAAAGAGTTAGAGAACAAGAAAACTATAGAACAACAAGAACAGCAACAACACTTCAACAATAACGTTAAGGTTAGAGCTTGTGACATGCCACTCAATTTGCAGAATCATGCTTTTCGTTGTGCATTTGATCTCTTGGATTCTATGCCATCAAAGAATCGTGATACTAAACGTCTTGCTCTTACCCTTAAGAAGGAATTTGACTCTACCTATGGTCCAGCTTGGCACTGCATTGTAGGTACTAGCTTTGGTTCCTATGTCACTCATTCTGTTGGTGGTTTCTTGTATTTTTCCATTAACAAAGTTCATATCCTTCTCTTCAAGACTGCTGTTGAACCATTACATCATTCATAA 369 0.3821 MEEGAEKELENKKTIEQQEQQQHFNNNVKVRACDMPLNLQNHAFRCAFDLLDSMPSKNRDTKRLALTLKKEFDSTYGPAWHCIVGTSFGSYVTHSVGGFLYFSINKVHILLFKTAVEPLHHS* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0330 122 SMART Dynein_light_2 23 114 IPR001372 GO:0007017|GO:0030286
Tpr3g0330 122 PANTHER DYNEIN LIGHT CHAIN 9 120 IPR001372 GO:0007017|GO:0030286
Tpr3g0330 122 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 14 115 IPR037177 GO:0007017|GO:0030286
Tpr3g0330 122 MobiDBLite consensus disorder prediction 1 21 - -
Tpr3g0330 122 PANTHER DYNEIN LIGHT CHAIN 9 120 - -
Tpr3g0330 122 MobiDBLite consensus disorder prediction 1 17 - -
Tpr3g0330 122 Pfam Dynein light chain type 1 28 114 IPR001372 GO:0007017|GO:0030286
Tpr3g0330 122 SUPERFAMILY DLC 24 114 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0330 Tpr-Chr3 3580597 3582894 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0330 K10418 - gmx:100305536 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0330 3 3580597 3582894 Tpr3g0330 3 3580597 3582894 ECH