Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0254 ATGGGAGATGGAAGCAGCAGCAGCAGCAGCAACGGTGATGTTCTGATGCTGGAAGCTCCGCCTTCTTACGGTAGGTCAAGCAATTCCGATGCCGAAATAATCGACGCATTGCCTTACATCGATGACGACTACAGTCACGAGAGTGTCAAGAAAGAAGTCGACCGTCTCGTTGAGGAAGAGATGCGCCGCAGCTCCAAAAAACCTTCTGATTTCCTCAAAGATTTTCCTCCTCTTCCCACTTTCAATTTCGAGGAGTACCCTATGATTGGTAGAGAGTATGAGCGTGTAAGAGCTGCTGGTAAGCCTCATTCGATTGACAGGGGGAGATATGAATTACAATTACCTCCGCCGAATAAAATGAACGATGAAACTGCTTGGAAACTATCTCTTCAAACTGCTCAACGTCTACTTCAATATCAAACTTTGAGGATGGAAAATTTGGATTTGTTGTTGAAATATGGTCCTCATGCTTGGAAACAACATAACCAACGATTGGAAGTTTACTTGTCAAGAATGCAGAAATTAGCTCAGGAACAAAATGATAAGATTGAAAAAGTTAACCGTGAAAGGAAATATCATCAGCAAAACACTGCATATGAGCTTAATGCTTTGTCCATGCAATGGAACGAGCTTTGTCAGAAAAATATAGACATCAAAGTTGCGTGTGCTTCAGTTGAAACTCACCTAAATGAACTGAGAAGAGAAGCAGCAGAAAGAGGCTGGAACTTAGATGCTATCACTGAAAATGGGCAATTGGCGAATTCGGAATCATGA 774 0.4225 MGDGSSSSSSNGDVLMLEAPPSYGRSSNSDAEIIDALPYIDDDYSHESVKKEVDRLVEEEMRRSSKKPSDFLKDFPPLPTFNFEEYPMIGREYERVRAAGKPHSIDRGRYELQLPPPNKMNDETAWKLSLQTAQRLLQYQTLRMENLDLLLKYGPHAWKQHNQRLEVYLSRMQKLAQEQNDKIEKVNRERKYHQQNTAYELNALSMQWNELCQKNIDIKVACASVETHLNELRREAAERGWNLDAITENGQLANSES* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0254 257 Coils Coil 169 196 - -
Tpr3g0254 257 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 32 238 IPR008409 GO:0006397
Tpr3g0254 257 MobiDBLite consensus disorder prediction 1 28 - -
Tpr3g0254 257 PANTHER PRE-MRNA-SPLICING FACTOR SPF27 26 240 - -
Tpr3g0254 257 MobiDBLite consensus disorder prediction 1 15 - -
Tpr3g0254 257 PANTHER BCAS2 PROTEIN 26 240 IPR008409 GO:0006397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0254 K12861 - gmx:100777152 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0254 3 2983509 2985949 Tpr3g0254 3 2983509 2985949 ECH