Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0205 ATGGAGAGAGCAAACACTAAATCTTCTTTGAAGTTTGTCAAGAACACTTCACCTTCTTCATCTCAATGGAGTAGTACTGATTCTAAAGGAATGACAAAAGATGTACTCAAAGACAAGTTTTATGACAAGTCTAAGGCTTCAAGAAAATCTCCTACGAAAGAAAATAATAAACCACAAGAAGCTTCAAGAAAATCTCCTACAAAAGAAAATACTAAACCACAAGAATTCAAACTCCACACACAAGAAAGAGCTGTTAAACGTGCAATATTCAACTATGAAGTGACAACAAAATTATATCTCATGGAGTTGAGAAAGAGACAAGAAGAGAAGTTGATGAAGATGATTGAAGAGGAAGAGATACGTTTGCTAAGGAAGGAAATGGTTCCAAGAGCTCAATTGATGCCTTATTTTGATAAGCCATTTTCCCCACAAAGATCAAACAGAACAGTTGCAAGAGAATCATGCATACACATGCTGACTAGCAAATGCTGGAGCTGCACTTCTGGCAATGGATTCTATAACATGCACCAATGTGGTCATCAAGCTCTTAACAATCCCATTAAATAG 567 0.3633 MERANTKSSLKFVKNTSPSSSQWSSTDSKGMTKDVLKDKFYDKSKASRKSPTKENNKPQEASRKSPTKENTKPQEFKLHTQERAVKRAIFNYEVTTKLYLMELRKRQEEKLMKMIEEEEIRLLRKEMVPRAQLMPYFDKPFSPQRSNRTVARESCIHMLTSKCWSCTSGNGFYNMHQCGHQALNNPIK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0205 188 MobiDBLite consensus disorder prediction 1 80 - -
Tpr3g0205 188 Pfam Targeting protein for Xklp2 (TPX2) domain 76 148 IPR027329 -
Tpr3g0205 188 PANTHER TARGETING PROTEIN FOR XKLP2 1 180 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Tpr3g0205 188 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 180 - -
Tpr3g0205 188 MobiDBLite consensus disorder prediction 8 30 - -
Tpr3g0205 188 MobiDBLite consensus disorder prediction 31 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0205 Tpr-Chr3 2597639 2600451 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0205 - - mtr:MTR_3g064800 301.212