Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0181 ATGTTTCTGTTTTTCTTCCTCTTTCTTTTCTTCTTCATCAACCCTTCTCAACAAACAACTTCACTCTCACTCTCTTTCCCTTTAACATCACTCTCTCTTACAACAAACACAACCTCAAAAATGCTATACACATCTCAACTATTTTCATCTTCATCTTCAAGAAAACCCAACAACAGCACACTAAACAAAACAACAGTACCTTCTTATAACTACAAATTTTCATTCAAATATTCGATGGCTCTCATCGTTAATCTTCCCATTGGAACACCACCTCAAACTCAACAAATGGTGTTGGACACAGGTAGCCAACTTTCATGGATTCAGTGTCAAAAAAAACAACCTCCAACGGCGTCGTTTAATCCTTCTCTCTCTTCAACTTTCTCTAATTTACCTTGCACTCACCCTCTTTGTAAACCACGAATTCCCGATTTTACCCTCCCAACTTCTTGTGACCAAAACCGTCTCTGCCATTACTCCTACTTTTACGCTGACGGTACTTACGCTGAGGGTAATCTCGTCAGAGAAAAATTCACATTTTCTCGTTCCGTTTCTACCCCTCCTTTAATTCTCGGTTGCGCTACAGAATCTACTGACCCCAGGGGTATTTTAGGAATGAATCTCGGAAGGTTATCCTTCGCTCATCAATCAAGAATTACTAAATTCTCCTACTGTGTACCCACTCGTCAAACTCAAACACAAACCCGACCCGGTTTATCTCCTACCGGATCTTTTTACCTCGGTAACAACCCGAATTCGAAATGGTTCAAGTACATTGGAATGGTGAATTTTTCTCCACGTCAACGCATGCCGAATCTTGACCCATTAGCTTATACTATCCCTATGCAAGGGATCAGAATTGCTGGGAAGAAACTAAACATCTCGCCGGCAGTTTTTCGTGCGGATGCTGGTGGGTCGGGTCAAACCATGATTGACTCCGGATCCGAGTTCAGTTATTTTGTTGGTGAAGCTTACGATAAAGTGCGGGAAGTAGTGGTTAAAGCTGTGGGGCCGAGAATTAAGAATGGTTACGTGTACGGTGGAGTAGCTGACATGTGTTTCGATAGTAAAAATGCTATTGAAATCGGACGGTTGATAGGTGAGATGGTTTTTGAATTTGAGAAAGGGGTGGAAATTGTGATTCCAAAGGAAAGAGTACTTGCTGACGTGGGTGGTGGGGTCCACTGTGTTGGAATTGGAAGTTCAGATAAATTAGGTGCGGCGAGTAATATTATTGGGAATTTTCATCAACAAAATCTATGGGTGGAATTTGATCTGGTGAATCGTAGGGTGGGATTTGGTAAGGATGATTGTAGCAGATTAGGGAAGTGA 1329 0.4184 MFLFFFLFLFFFINPSQQTTSLSLSFPLTSLSLTTNTTSKMLYTSQLFSSSSSRKPNNSTLNKTTVPSYNYKFSFKYSMALIVNLPIGTPPQTQQMVLDTGSQLSWIQCQKKQPPTASFNPSLSSTFSNLPCTHPLCKPRIPDFTLPTSCDQNRLCHYSYFYADGTYAEGNLVREKFTFSRSVSTPPLILGCATESTDPRGILGMNLGRLSFAHQSRITKFSYCVPTRQTQTQTRPGLSPTGSFYLGNNPNSKWFKYIGMVNFSPRQRMPNLDPLAYTIPMQGIRIAGKKLNISPAVFRADAGGSGQTMIDSGSEFSYFVGEAYDKVREVVVKAVGPRIKNGYVYGGVADMCFDSKNAIEIGRLIGEMVFEFEKGVEIVIPKERVLADVGGGVHCVGIGSSDKLGAASNIIGNFHQQNLWVEFDLVNRRVGFGKDDCSRLGK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0181 442 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 96 107 IPR001969 GO:0004190|GO:0006508
Tpr3g0181 442 CDD pepsin_A_like_plant 82 437 IPR034161 -
Tpr3g0181 442 Gene3D Acid Proteases 53 235 IPR021109 -
Tpr3g0181 442 Gene3D Acid Proteases 247 441 IPR021109 -
Tpr3g0181 442 SUPERFAMILY Acid proteases 82 440 IPR021109 -
Tpr3g0181 442 PANTHER ASPARTYL PROTEASE-RELATED 4 442 IPR001461 GO:0004190|GO:0006508
Tpr3g0181 442 Pfam Xylanase inhibitor N-terminal 82 230 IPR032861 -
Tpr3g0181 442 Pfam Xylanase inhibitor C-terminal 276 433 IPR032799 -
Tpr3g0181 442 ProSiteProfiles Peptidase family A1 domain profile. 81 433 IPR033121 -
Tpr3g0181 442 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 4 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0181 Tpr-Chr3 2282680 2284725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0181 83 442 Miscellaneous Gene Families AT1G44130 24.372 7.01e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0181 - - gmx:100803089 640.958