Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0178 ATGTCTCTCCGCATGGCAATGGCTAAACTACTTAAAAAACTTCGCTTTTCTGCTTCCCACGCTTTCTCCTCCTCTACAGTTACCACTAATTCATTGCCCGTTTCATTTTCCGGTAAAAGACTTTCTCACTGGTATCAAACTGGAGAATATGGTTGGAGAGCAAATCTTAGGGATCCTTGTTTATGGATTGTTATATCTGGACATGTAGTTGTGACTCTGGGGATTAGTGCCAACACTGCGTTTGCAGAGGATGTAACGTCCGAAACATCTTCTGCAAATAGCACCGGGGATGACTTAACTGGATTAAGAAAAATTGAGGATGGTTCTGTAGCATCAAATATACATACAGCAAAATGGAGAGTCTTTACCGATAAAGGAAGAGAGCTTTTCCTACAGGGAAAATTAGATGATGCTGAAAGACTATTCGTAGCTGCCATACAAGAAGCTAAAGAAGGTTTTGGCGAGCAAGATCCGCATGTTGCGTCTGCATGCAACAATCTGGCAGAGTTGTACAGAGTAAAAAAGGCATTCGACAAAGCAGAACCGTTGTATTTGGAAGCTATCAAGATCTTAGAGGAATCTTTTGGTCCTGATGATGTAAGGGTTGCGGTTGCTGTTCACAACCTAGGGCAGTTCTATGTTGGACAGAGGATGTTGGAAAAAGCTCGAGTTAGCTATGAGCGCGCTTTGAAGATAAAAAGGCGTGTTCTGGGATATGGCCATTCAGAATGTTCAGATACAATGTATCAGATCGGCATGGTGTTGTATCTTCAAGGAAAAGAAAGGGATGCGGAGACCATTATTAAGGAATCAATAAGCATGCTAGAGACCGGTGGTGAAGGGGAGTCATTTGTATGCATTAGAAGACTTCGTTTCCTCTCACAGTTATATTTGAAATCAAATCGTCTCGATGAAGCTGAGATGATCCAAAGAAAGATCCTGAATATAATGGAATTATCAAAGGGATGGTATTCCTTGGACACAGTTATTGCAGCTGAATCCTTGGCTCTAACCCTACAAAAATCTTCCGAAACAAAACAATCGAAAGAGCTTCTTGAAAGATGTCTTGATGTCCGGAAAGCTTTACTTCCTTGTGATCATATTCAGATTGGTGCAAATCGACTTCATCTAGCAAGAGTAGCAATGCTTGATTGTAGCCAATACAAAGAATCTGATGTTTCTAGAGCTAAAGCTGAGCTTGTTATGGCAAAGGATCATTTGCATAATTCCATAAGGATTGCGCGTCAATGTTTAGATAAAGTGTTGAAACAAAAAGACAAGTCGAAGAAAAACAGTGTGCGTGGAAATTCTAGAAAGGAATCCCAAGCAGCACTTGTCATATTGTTGCAATCACTCAGTACTCTAGCATCGGTGGAGTTGGCTAAGCAAGAATTGCAGAAAATTCAGGAAGGGGATATTAACCTCGAGGCTCAAGAAGCACTTCTTCAATGCATTGCTGCTTACAACGAGTTTGTTATACATAAGAAGTCCATTGTTGATTCTCCTGAAATAAAGAATGCATATCTTTCATGTTTTAAGCATGCTCAAACATTGCTTGGCAATAAACTTGATGAGAGAGTATCCAAAAGCTGA 1593 0.4043 MSLRMAMAKLLKKLRFSASHAFSSSTVTTNSLPVSFSGKRLSHWYQTGEYGWRANLRDPCLWIVISGHVVVTLGISANTAFAEDVTSETSSANSTGDDLTGLRKIEDGSVASNIHTAKWRVFTDKGRELFLQGKLDDAERLFVAAIQEAKEGFGEQDPHVASACNNLAELYRVKKAFDKAEPLYLEAIKILEESFGPDDVRVAVAVHNLGQFYVGQRMLEKARVSYERALKIKRRVLGYGHSECSDTMYQIGMVLYLQGKERDAETIIKESISMLETGGEGESFVCIRRLRFLSQLYLKSNRLDEAEMIQRKILNIMELSKGWYSLDTVIAAESLALTLQKSSETKQSKELLERCLDVRKALLPCDHIQIGANRLHLARVAMLDCSQYKESDVSRAKAELVMAKDHLHNSIRIARQCLDKVLKQKDKSKKNSVRGNSRKESQAALVILLQSLSTLASVELAKQELQKIQEGDINLEAQEALLQCIAAYNEFVIHKKSIVDSPEIKNAYLSCFKHAQTLLGNKLDERVSKS* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0178 530 Gene3D Tetratricopeptide repeat domain 286 429 IPR011990 GO:0005515
Tpr3g0178 530 Gene3D Tetratricopeptide repeat domain 119 283 IPR011990 GO:0005515
Tpr3g0178 530 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 522 - -
Tpr3g0178 530 SMART tpr_5 119 152 IPR019734 GO:0005515
Tpr3g0178 530 SMART tpr_5 161 194 IPR019734 GO:0005515
Tpr3g0178 530 SMART tpr_5 245 278 IPR019734 GO:0005515
Tpr3g0178 530 SMART tpr_5 203 236 IPR019734 GO:0005515
Tpr3g0178 530 Pfam Tetratricopeptide repeat 163 234 - -
Tpr3g0178 530 SUPERFAMILY TPR-like 117 264 IPR011990 GO:0005515
Tpr3g0178 530 Coils Coil 521 530 - -
Tpr3g0178 530 SUPERFAMILY TPR-like 242 359 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0178 - - ccaj:109796654 800.045