Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0173 ATGATTACTACATTTGTTTATTTCATGAAACTCAGCTGCCAAGAAATTAATCATGCTTCAAAAGAGGGAAAGGAAAAACATGATGAACATGACCACATTTTGTCTGGAGCAAATAAAACTGATCATGAGATAATATTGAGGTTGCCAGATGATGCAGAAGTGAGCAATGACCTATGGGATGAGGTGATAGAATGTATGAAGGTTAGGGTACGGGACAAGATCCATGTGGTGCGTACTTTTGCGGTTAGGGCACTTTCGCGTTTCGTGAATGACTCTTCAAACATTGACATCCTTGATTTATTCCTGGAGACGCTTCCTTTGGAACAAAATGCGGACGTTCGTAAGATGATTGTGTTGTCTCTGCCTCCTTCCAGTGCAACCTCTCAAGTTATCATTGACTGTACCTTGGATGTGAGTGAATCTGTTCGCAAAGCAGCATACTGTGTTTTAGCTAATAAATTTCCTCTTCAAAGCTTAAGCATTAAGCTCAGGACAATTATTCTTCGTAGAGGACTTTCTGACCGATCTGTTGGTGTCTCAAAGGAATGTTTCAAACTATTGAAAGATGAATGGCTTATAAAGTGCTGTAATGGTGATCCTTTAGAGCTTTTGAAGTATCTCGATGTTGAAACCTATGAATCAGTGAGCGAGTCTGTCATGGAGGCACTTCTAAAAGCTGGTTTAGTAAAACTAAAGAATGGTGCAAGTATCCAGCAGTATATATCATCAAATGGCGACACAGAAGAAGGGGAAGCGGTTCCTTGTCCACCAACCATTGTACTGATGGAAGCAGAGGCTGCTCTTTATTGGAGAACTGTTTGCAAACATTTGCAGTCAGAAGCACATGCTTTAGGCTCTGATGCTGCTGCCACAGCGGGTACCGAAGCAGAAGTATATGCTGCAGAAGCATCAGATAAAAATGACCTTCTAGAAAAAATTCTTCCTGCTACAGTTGATGAGTACATCGAGTTGGTCAGAGCCCATATCGTTGCTGGATCAAACCATCGCTTTGCATGCCGGCAGCTGCTTTTGCTTGGTGCTATGTTTGATTTTTCTGACACTTCATATAGGAAAGCTGCTAGTGTGTTTCTGCAGGAGCTGATGAGCAAGCCTCCGGAGCACGAGGTTGATAATGAAGGGAACATTGTCGTCATTGGAGATGGCTTAAGTTTTGGTGGAGATACTGAGTGGGCAGAAGCCATAGCCAAATTGGCAAGGAAAGTCCATGCTGCTCCAGGTGAATTTGAAGAAGTTGTTCTTGCAATTGTAGAAAAGCTTGCTCAACCTTGCAGAGAGAGAACAGCAGATTATGTGCAGTGGATACACACCCTTTCTCTTATAGGTCTTCTACTGAAAAATGCAGTGTCAATGCGCTTTCTTCAGGGCAAGGCGATAGAACCAGATGAGCTACTCCAATCATTACTTCTTCCTGGGGCAAAACAATCTCACTTGGATGTGCAAAGAATTGCTGTAAGATGTCTTGGCCTCTTTGGGCTTTTGGAGAGGAAACCAAATGCTGAACTTTTGAAACAGCTACGGGTTTCATATATTAGGGGGCCGCATTTAATTAGTATTGAGGCTGGTAAAGCATTAACTGATCTTGTGATGTGGCATGGTCCTCAAGAAGTTGACAGGGTTTTAAATCACGATATTCCAAGCCAAGTAAACAGTGACAAAAAGTGTTTTTGTCCTGTGAATTTCTCTGATTCAGAAGTGGATTCAAATTCAAACGTTGACATGCTTGATCTTTTATACGGTGGCATTGAAAATGAAGACTGGGCTAATCCTTTAACTAGCAATGAAGATGAAAGCATTTATGCTATACTTGGGGAGGGCTTTGCGAAAATTCTTCTCCTAAGTGACAACTATCCAAGCATACCAGCTTCTTTGCACCCTGTGCTTTTATCTAAGCTCATTTACTTGTACTTCAGTGACATATCAGAAAATATGCACAGGTTGAAGCAATGCTTATCTGTTTTCTTTGAGAACTACCCGTGTCTCTCAACAAATCACAAGAGGTGTATATTGAAGGCCTTCATTCCAGTTATGCGTTCAATGTGGCCAGGAATATTTGGCAATTCTGGGGGTTCTCCTTTTGTGATATCTCAGATGCGTAAGCGTGCGGTTCAAGCTTCACGTTTTATGTTGCAGATGGTACAGATTCCATTATTTGTTAAAGAGACCGAAGCTGCATGTGAAAACTCTAGTACAGAACAGCCACAAGTTATAGATAGTTGCACTGAAGTCCCATTTGAGTGTGGCGAGGAGGGGCTCGCACTACGCATAGCCGTGGAGGTTGCAAGCTTTCACTCAAAGAAGACAGCTGCTGAGAAGGCATATGTATCGGCATTATGTAGAGTACTTGTCTCGCTTCATTTTCGGTTATCAGAACAAGGGCCAATAAAAATTATGAGGAAACTTTTATGTCGTATGATTGAATGTGTATCTTCAGAGAAGGACCTTGTTAAAGAATTGAAGCGAATGGCGGATCATCTAGTGACAATTGACAGGCAACAAGACCAGGAATTGTTGCAAGATGAAGTTAATCTCATTTTGGGGAAACTGGAATTCGACTTCAACCTTGATTTGGATGCTTCTGTTGCAATACCACAAACACCAGCTGTACAGCGAACGAGAGCTACACGAACAAGGAGAAGGGTAAGGATCGAGGAAGATAGTTCTTCTGACGATGAAGAAGATTCATATGTTTCTGTGGTTCCTACCACCATTAATACGGTAAAAGGTCGCTCACAGAGAGCAAGCAAAACTGCAGCCATTAACAAGATGTCGTCTGCCGTTAGATCAGTCAAACCTGATGAAATTGAAGAGGAAGAGGAAGAGGAACAGGAAGAAGAGTCGAACGTGACATCTGAAGATTCTGAAGAATCGGAACAGAGTAGTTAA 2904 0.4198 MITTFVYFMKLSCQEINHASKEGKEKHDEHDHILSGANKTDHEIILRLPDDAEVSNDLWDEVIECMKVRVRDKIHVVRTFAVRALSRFVNDSSNIDILDLFLETLPLEQNADVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPLQSLSIKLRTIILRRGLSDRSVGVSKECFKLLKDEWLIKCCNGDPLELLKYLDVETYESVSESVMEALLKAGLVKLKNGASIQQYISSNGDTEEGEAVPCPPTIVLMEAEAALYWRTVCKHLQSEAHALGSDAAATAGTEAEVYAAEASDKNDLLEKILPATVDEYIELVRAHIVAGSNHRFACRQLLLLGAMFDFSDTSYRKAASVFLQELMSKPPEHEVDNEGNIVVIGDGLSFGGDTEWAEAIAKLARKVHAAPGEFEEVVLAIVEKLAQPCRERTADYVQWIHTLSLIGLLLKNAVSMRFLQGKAIEPDELLQSLLLPGAKQSHLDVQRIAVRCLGLFGLLERKPNAELLKQLRVSYIRGPHLISIEAGKALTDLVMWHGPQEVDRVLNHDIPSQVNSDKKCFCPVNFSDSEVDSNSNVDMLDLLYGGIENEDWANPLTSNEDESIYAILGEGFAKILLLSDNYPSIPASLHPVLLSKLIYLYFSDISENMHRLKQCLSVFFENYPCLSTNHKRCILKAFIPVMRSMWPGIFGNSGGSPFVISQMRKRAVQASRFMLQMVQIPLFVKETEAACENSSTEQPQVIDSCTEVPFECGEEGLALRIAVEVASFHSKKTAAEKAYVSALCRVLVSLHFRLSEQGPIKIMRKLLCRMIECVSSEKDLVKELKRMADHLVTIDRQQDQELLQDEVNLILGKLEFDFNLDLDASVAIPQTPAVQRTRATRTRRRVRIEEDSSSDDEEDSYVSVVPTTINTVKGRSQRASKTAAINKMSSAVRSVKPDEIEEEEEEEQEEESNVTSEDSEESEQSS* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0173 967 SUPERFAMILY ARM repeat 43 665 IPR016024 -
Tpr3g0173 967 PANTHER CONDENSIN COMPLEX SUBUNIT 3 43 948 - -
Tpr3g0173 967 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 43 948 IPR027165 GO:0000796|GO:0007076
Tpr3g0173 967 MobiDBLite consensus disorder prediction 875 967 - -
Tpr3g0173 967 Coils Coil 941 961 - -
Tpr3g0173 967 MobiDBLite consensus disorder prediction 900 930 - -
Tpr3g0173 967 MobiDBLite consensus disorder prediction 940 967 - -
Tpr3g0173 967 Pfam Nuclear condensing complex subunits, C-term domain 444 793 IPR025977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0173 Tpr-Chr3 2186751 2203366 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0173 K06678 - gmx:100817677 1422.91