Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0171 ATGGTTGCTTTGGTTTCACAAGAAAATGTTGTGACATTGGTTTCTCGTACTGGTAGAGAGTTACAACGTTATAGAAAAGGTCGTCGTCAAGTTGTCGGATGTATACCATATAGATATAAGATTGGGGAGAAAAATTCTTTAGATGTTTCAGATGAATTGGAAGTTCTTGTTATAAGTTCTCAAAAAGGGAAAGGGATGCTATTTCCAAAGGGAGGCTGGGAGTTAGATGAATCTCAGAAAGAGGCAGCTTTGAGAGAAACCATAGAGGAAGCTGGTGTGCGTGGCATTGTTGAGGGTAAATTGGGTAAATTGGAGTTTTGGCCTGAACAAAACCTTCGTCAAAGAACATGGATGAGCATAAAAGAGGCAAGAGATGTTTGTCAACACTGGTGGATGAAAGAGGCTTTGGACAGACTAGTAAACCGTTTGATGGGTCAAAAACTTGGTCGTGAAAACCATATTCTTCGTTCTCTAAATTGCATTGGAGATGCCAAATCTGACTTGTTAATAGTGTAA 516 0.3953 MVALVSQENVVTLVSRTGRELQRYRKGRRQVVGCIPYRYKIGEKNSLDVSDELEVLVISSQKGKGMLFPKGGWELDESQKEAALRETIEEAGVRGIVEGKLGKLEFWPEQNLRQRTWMSIKEARDVCQHWWMKEALDRLVNRLMGQKLGRENHILRSLNCIGDAKSDLLIV* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0171 171 CDD Nudix_Hydrolase_9 30 133 - -
Tpr3g0171 171 ProSiteProfiles Nudix hydrolase domain profile. 27 171 IPR000086 -
Tpr3g0171 171 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 104 164 - -
Tpr3g0171 171 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 106 - -
Tpr3g0171 171 SUPERFAMILY Nudix 23 143 IPR015797 -
Tpr3g0171 171 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 106 - -
Tpr3g0171 171 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 104 164 - -
Tpr3g0171 171 Pfam NUDIX domain 54 124 IPR000086 -
Tpr3g0171 171 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Tpr3g0171 171 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0171 Tpr-Chr3 2145318 2148260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0171 K07766 - gmx:100795999 277.715