Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0170 ATGTCCAAAACAAAAACACTCATCTCCCTCATAATCTTCTCAACTTTCATTCTCCATTCTTTTTCCATCTCCACAGACACATTCCTCTACGGAGGGTGCACACAACAAACATACACCCAAAACTCACCCTACGAATCCAACCTCAACTCACTCCTCACTTCCCTAGTCAACTCAGCAACTTACACATCCTACAACAACTTCACAATCATCGCCTCAAATCCCACCGACATCGTTTACGGCCTCTACCAATGTCGTGGCGACATCTCCATGCCAGACTGCTCCTCCTGCGTTGCACACGCCGTCTCACGTGCCAGAGACATTTGTCCAGGTGCGTGCGGCGGGGTAGTGCAACTAGAAGGATGCTATGTGAAATATGATAATGTTAAGTTTTTGGGTGTGGAGGATAAAACAATTGTGTTGAAGAAATGTGGACCCTATGTTGGGTATGATACGGGTACCCGAGATGCGGTTTTGTCCGGGTTAATGGGTTCGGGTGGTGGGTATTTTCGGGTTGGTGGGTCGGGTCAGTTGAAGGGAATGGCGCAGTGTATTGGTGATTTGAGTTTTGTGGAGTGTGAGGATTGTGTTTCGGAGGCCATCCGACGGTTGAGAAGTGACTGCCCAGCCGCGGATTTTGGTGATATGTTTTTGGGGAAGTGTTATGCGAGGTACTCTACTGGTGGTGGTGGTGGGGCCCATTCTTACTCCAAGGCCCATGGTAAATCGGACAACAATGGTGAGAAGACATTTGCCATAATTATTGGATTATTAGCAGGTGTAGCTATACTTATTATTTTCCTAGCTTTCTTAAGAAGGATTTGTGAGGGACAAGGTAAATAA 840 0.4679 MSKTKTLISLIIFSTFILHSFSISTDTFLYGGCTQQTYTQNSPYESNLNSLLTSLVNSATYTSYNNFTIIASNPTDIVYGLYQCRGDISMPDCSSCVAHAVSRARDICPGACGGVVQLEGCYVKYDNVKFLGVEDKTIVLKKCGPYVGYDTGTRDAVLSGLMGSGGGYFRVGGSGQLKGMAQCIGDLSFVECEDCVSEAIRRLRSDCPAADFGDMFLGKCYARYSTGGGGGAHSYSKAHGKSDNNGEKTFAIIIGLLAGVAILIIFLAFLRRICEGQGK* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0170 279 Gene3D - 25 130 IPR038408 -
Tpr3g0170 279 Gene3D - 155 227 IPR038408 -
Tpr3g0170 279 Pfam Salt stress response/antifungal 174 226 IPR002902 -
Tpr3g0170 279 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Tpr3g0170 279 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Tpr3g0170 279 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 275 - -
Tpr3g0170 279 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 7 275 - -
Tpr3g0170 279 ProSiteProfiles Gnk2-homologous domain profile. 131 229 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0170 Tpr-Chr3 2125739 2128561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0170 5 225 Receptor kinase-like Gene Family AT4G05200 27.083 4.83e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0170 - - gmx:100811615 372.859