Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0168 ATGGTTATGCATTTTCTTCTTCTGCTTCTTCTTGCAGTGTCTACTGTTGCAGCTGATGAAGAACCATTTATTGGAGTGAACATTGGTACAGATCTCTCAGACATGCCTCACCCTACTCAAACAGTTGCATTGCTCAAAGCTCAACAAATTCGACACATTCGATTATATAATGCAGACAGCGCTATGCTAACTACATTATCAAAATCAGGAATTCAAGTTGCTATCTCTGTCCCTAATGAAGAGCTTCTCGCAATAGGCCAATCAAACTCCACAGCTTTAAATTGGGTTTCTCGCAATGTGTTAGCATATTATCCATCCACAAATATCACATCTATTTGTGTTGGTTCTGAGGTTTTAACGACACTCCCAAATGCAGCTAAACTCTTAATCAATGCACTTAAGTACATTCATTCAGCCCTTGTCGCGTCGAAGCTGGATTCCAAAATCAAAGTCTCGACTCCACTTCCTTCTACCATCATACTTGATTCATTTCCACCTTCACAAGCCTTTTTCAATACCTCAATGAATCAAGTTTTGATTCCAATGCTTGATTTCTTGCAATCCACTCAATCTTATCTCATGCTTAATATTTATCCTTATTTTGATTACATGGAATCAAATGGTTTTATCCCTTTGGATTATGCACTTTTCAAACCACTTCCACCAAACAAAGAATCTATTGATTCTAACACACTTCTTCATTACTCCAATGTGTTTGATGCTGTCATCGACGCGGCATATTTCGCAATGTCGTATCTTAATTACACAAACATTCCTGTCATTGTGACTGAAACCGGTTGGCCTTCGAAAGGTAGCTCTAATGAGCCCGACGCAACACTAGACAATGCTAATACTTACAACAGCAATTTGATCAAGCATGTGTTGAACAAAAACGGAACGCCGAAACATCCCGGAATCGGTGTTAGTACTTATATCTACGAGCTATACAATGAGGACAAAAAGCCAGGGGCATTGTCAGAGAAAAATTGGGGACTATTTGATTCAAATGGTGTACCTGTTTATGTTTTACAATTGACAAATTCAGGGGCAGTTTTGGCAAATGATACAAAAAATGAAACTTATTGTGTTGCTAAAGATGGTGCTGATCCAAAAATGTTACAAGCTGGTATTGATTGGGCTTGTGGACCTGGAAAAGTGGATTGTTCTCCATTGTTGCAAGGAGAACCTTGTTATGATCCTGATAATGTTGTTGCACATGCTAATTATGCTTTTGATGCTTATTATCATCAGATGGGAAAGTCTACAAAGTCTTGTGATTTCAATGATATGGCTACAATCTCCACTTCAAATCCAAGTCATGGTTCTTGTATATTTGCAGGAAGTCTTGGAAGAAATGGTAACGCCCCTGAACCTTCACCCAATTTCATGGATTCACATTCTTCTGCATATGAATTGAGAATTAGAAGCCTTCTTATTGTGATAGGACTTCTAATATGGGGGGAAGTGGTTTTGCTATAA 1479 0.384 MVMHFLLLLLLAVSTVAADEEPFIGVNIGTDLSDMPHPTQTVALLKAQQIRHIRLYNADSAMLTTLSKSGIQVAISVPNEELLAIGQSNSTALNWVSRNVLAYYPSTNITSICVGSEVLTTLPNAAKLLINALKYIHSALVASKLDSKIKVSTPLPSTIILDSFPPSQAFFNTSMNQVLIPMLDFLQSTQSYLMLNIYPYFDYMESNGFIPLDYALFKPLPPNKESIDSNTLLHYSNVFDAVIDAAYFAMSYLNYTNIPVIVTETGWPSKGSSNEPDATLDNANTYNSNLIKHVLNKNGTPKHPGIGVSTYIYELYNEDKKPGALSEKNWGLFDSNGVPVYVLQLTNSGAVLANDTKNETYCVAKDGADPKMLQAGIDWACGPGKVDCSPLLQGEPCYDPDNVVAHANYAFDAYYHQMGKSTKSCDFNDMATISTSNPSHGSCIFAGSLGRNGNAPEPSPNFMDSHSSAYELRIRSLLIVIGLLIWGEVVLL* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0168 492 Gene3D Glycosidases 23 351 - -
Tpr3g0168 492 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 470 IPR044965 GO:0004553|GO:0005975
Tpr3g0168 492 Pfam Glycosyl hydrolases family 17 24 344 IPR000490 GO:0004553|GO:0005975
Tpr3g0168 492 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Tpr3g0168 492 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 7 470 - -
Tpr3g0168 492 Pfam X8 domain 361 432 IPR012946 -
Tpr3g0168 492 SMART X8_cls 360 445 IPR012946 -
Tpr3g0168 492 SUPERFAMILY (Trans)glycosidases 24 343 IPR017853 -
Tpr3g0168 492 Gene3D - 354 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0168 Tpr-Chr3 2060158 2064043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0168 18 483 Glycoside Hydrolase AT1G66250 69.053 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0168 K19891 - gmx:100799965 813.527