Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0167 ATGTCACTTTCATGTGGGGTCGAATGTGTTTTCGTCCTCGGCTGTGCACGTTGGCTATGGAAACGTTGCACATACATCGGTTCCTACGACAGTGCCACGTGGCCATCCGCCACCGCCGTCGAATTCGAATCAGTGCCACGTGTCTGCCGACTCATCCTCGCTATCTACGAACCCGATCTTCACAACCCACAAAACTATATACCTGCTAATGGGTATCGCTTGAAACCTGATTGGGTTATAAAGCGCGTGACTTATGAAGAAACTCAAGGTCACGCGCCGCCGTATATAATCTACGTTGATCATGATCATCGCGAGATTGTTATGGCGGTGCGTGGTTTGAATTTAGCTAAAGAAAGTGATTATAAGACTTTGTTGGATAATAAGTTAGGACAACAAATGTTTGATGGTGGTTATGTTCATAATGGGTTGTTGAAATCTGCTGTTTGGTTGTTGAATAAGGAATCTGAGACATTGAAGAGTTTGTGGATTGAGAATGGTTCTGATTATGGGATGGTTTTTGCTGGACATTCTTTAGGGAGTGGTGTTGTTTCTTTGTTGAGTATTCTTGTTGTGAATCATAGGGAACGTTTGGGTGGGATTGCTAAAGAGAAGATTAGGTGTTATGCTATTGCTCCTGCTAGATGTATGTCGCTTAATTTGGCTGTTAAATATGCTAATGTTATTCATTCCATTATTTTGCAGGATGATTTCTTGCCTAGAACGGCCACTCCATTGGAAGATATATTCAAATCAATATTTTGCTTGCCCTGCTTATTATTCTTGGTTTGCTTGAGGGATACCTTCATACCCGAGGATCGAAAGCTGAGAGATCCAAGGAGACTTTATGCACCTGGACGAATGTACCATATTGTTGAAAGGAAATTTTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACGGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGCAACACAACAGCAGATCATGCAATTATTTGGATAGAAAGGGAAGCAGAGAAAGCCTTACAATTAATGAAGGATCAAGACAGCTCCAAAACCGTGACAGTCCCTCCAACAATACAAAAGTTTGAGAGATTGAAAACCATAGAAAAAGAACATAAAGATGCTTTGGAAAGAGCTGTTAGCTTAAATGTACCTCATGCAGTAGACAGTGCAGAGGAGGAACAGCTGGAAAACAACGGTGAGGGATCCAGTAGTAGTGGCGACAAAGAAACCGCCTCAAGTACTGAAATGAAACCAAGTGGTGGAAGATTAACCTGGGAAGAGGTTGTCGAAAAGTTGTTGAAGAAGAATGAAACTGGAGAAAAACACATCGAAGAGGATACAAATACACCACATTGA 1359 0.4194 MSLSCGVECVFVLGCARWLWKRCTYIGSYDSATWPSATAVEFESVPRVCRLILAIYEPDLHNPQNYIPANGYRLKPDWVIKRVTYEETQGHAPPYIIYVDHDHREIVMAVRGLNLAKESDYKTLLDNKLGQQMFDGGYVHNGLLKSAVWLLNKESETLKSLWIENGSDYGMVFAGHSLGSGVVSLLSILVVNHRERLGGIAKEKIRCYAIAPARCMSLNLAVKYANVIHSIILQDDFLPRTATPLEDIFKSIFCLPCLLFLVCLRDTFIPEDRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNTTADHAIIWIEREAEKALQLMKDQDSSKTVTVPPTIQKFERLKTIEKEHKDALERAVSLNVPHAVDSAEEEQLENNGEGSSSSGDKETASSTEMKPSGGRLTWEEVVEKLLKKNETGEKHIEEDTNTPH* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0167 452 MobiDBLite consensus disorder prediction 397 420 - -
Tpr3g0167 452 CDD Lipase_3 41 240 - -
Tpr3g0167 452 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 449 - -
Tpr3g0167 452 Pfam Lipase 3 N-terminal region 7 64 IPR005592 GO:0016042
Tpr3g0167 452 Gene3D alpha/beta hydrolase 34 252 IPR029058 -
Tpr3g0167 452 MobiDBLite consensus disorder prediction 388 427 - -
Tpr3g0167 452 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 449 - -
Tpr3g0167 452 Pfam Lipase (class 3) 107 242 IPR002921 GO:0006629
Tpr3g0167 452 SUPERFAMILY alpha/beta-Hydrolases 38 243 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0167 Tpr-Chr3 2052229 2056861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0167 1 343 Miscellaneous Gene Families AT5G37710 75.510 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0167 - - gmx:100798831 721.465