Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0115 ATGGCTTCTCCAACTCACAATTGGAGAACTCAAAAGATTACACTAGTGCTACTTATTATTTGTATTTCATTTTCCTTTTCATTTGAAGAAGCTATAATAACATCTCCAAAGAAGTTAGATTATCCAGTGGTTGGTCAGCCAGCAGATTACACCGAAATCAAGTGTGGATCATGTCCGTGTGGATCTACGTGTGGTGACCAATCTCCTCCACCTCCACCTCCACCTCCATCTCCGCCACCACCTTGTGAACCACCAACACCACCACCTCCTCCGCCACCACCTCCTCCACCATCACCACCTCCTCCTCCTCCCAAGTGCCCTCAAAATTGTAACCCCTTGCTACCACCACCGCCACCGAGGTTCATATATGTGCCGGTGCCAGGTCAGGTAAACCAACCTAAACCATATTGGATATATTATTACTCTGGAGCTGAAAACAGAGTTGGGAGTTTGCTGGTTTTAGCTTTGGGACTATTAATTGCAACAGTATTTGGATGA 498 0.4598 MASPTHNWRTQKITLVLLIICISFSFSFEEAIITSPKKLDYPVVGQPADYTEIKCGSCPCGSTCGDQSPPPPPPPPSPPPPCEPPTPPPPPPPPPPPSPPPPPPKCPQNCNPLLPPPPPRFIYVPVPGQVNQPKPYWIYYYSGAENRVGSLLVLALGLLIATVFG* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0115 165 PRINTS Proline rich extensin signature 69 81 - -
Tpr3g0115 165 PRINTS Proline rich extensin signature 81 102 - -
Tpr3g0115 165 PRINTS Proline rich extensin signature 112 128 - -
Tpr3g0115 165 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 1 164 - -
Tpr3g0115 165 PANTHER PROTEIN, PUTATIVE-RELATED 1 164 - -
Tpr3g0115 165 MobiDBLite consensus disorder prediction 66 104 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0115 - - gmx:102663346 87.0409