Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0098 ATGGTGTTGAAGAAGAGGGTAAATAATGGATTCACTGGCTTTCAAGTTCCGGTTATTCCTAAAGCTCCTAGATCTGCAAGAGGAAGGGGTGCATTAAACAAAACGGTTGAGGATGGTCAAGTTTGTGCTTTTGAAATATTGGCGTCGATAGCTGGCAAGCTATTGGAGGAAAGTGAAAGTTCTGCTTCTAGCAATGCATCCGAAGCAAATAGCCAAGGTGTCATTGTGCAAGATCGACAAGATGAAGGTAAACCATCGATGATGGAGGGAATTCATCAAGGAACCTGTACAGATAGTATATTTACAACTGACGTAGCCTCACAAAACCGTGATCAGAAACCTCTTCTGCACGTGAAGTCCGATTTTTCATTGGAAAAAGTTGAAATAGCTAATGTGAAGACTGAAACGGTTGAATCATATAATAAATATGGAAGTTATACTAATAGATTAGTAGAAGCACCTGAAAATTTCAGGGAGTCTTGTAACAGGAAAATTAAGAAAGGATTCAGATCCGATAAATGTGGTTTGAAAGATCGGCTAGAATTGTACATGTCTCCTTCTCTGGCCGACTCAAAAACTAATGTAAAATATCCACTTCATAGGAAGCCTTTCCCCACCGATTCCTTTGCCAAGCGTGGGAATGGCATTAAGATAGATTTTAGAGATGATGACGAAAACTTTTTAAGGTGCACAAAGGTTTGCACTAAGTCGAAGGCTTTTAGGTCTCCACGACGCATGGCACACCGCAGAATCAAGAATCTGCTGTCTTCTAAATACTGGAACGTTGCTCCAAAGTTGAAGGACTGTGAACTTTCTAGATCTGATCTCGAAGTACCTCTTTATCGTAAGAGGAAGACTTGTAACAATTCCGACAGATCTCGCCACAGCACCATTGTTAAGAGGAGGAAATTCTTTGACCGGGTTTCTGGAGTAACTTCTGATGGAGGATTTAGCAGCGAGAGTGTGTCAAATTCGCCTGAGAAAGGAATGGATGGACACAAGCCTAGCTCCTCTTCGAAACTGCAAGTAACCGAGGATTCTCATGTGAAATTTCGCATTAAGTCGTTTAAGATACCAGAGCTTTACATCGAGGTTCCCGAAACTGCAACTGTTGGTTCACTAAAGAGGACAGTCATGGAGGCAGTTATGGCTATAATTGGAGGCGGTATGAATGTCGGTGTTCTTCTTCAGGGAGAAGACATTGGAGATGACAATAGAACACTTGAGCAGACTGGTTTATCTTGCAATGAGAATCTGGATGCCCTCAGTTTCATGTTGGAGCCTAGTTCTCTACTAGCTTCTCTTCCTGTTTCTTGTGTTGGTGATCCTTCTTCTCAATGCGAAACATCCGAACCTATCAGGTCTCCGGAAACTCCTGCATTAGATTCAGGGATATCTGATCCCGTGTGTGACATCAATTTGCCGACAAATCAAGACACTCTAGTTGAAAATAACCATGACTCTACTTGTTCTCCCACTGACACCATAGTTGACAAAATAACACCAGATCATTCCAGAGCGATTGTTGCTCTTCCGGCTAGTACCGAACCATTAGCTATGGTCCCTGTGAGTCAGAAAGTCAAGCGTTCCGAGTTTATACATCGTCGAACCAGGAGACCATTCTCTGTAACTGAGGTAGAAGCACTTGTTCATGCAGTTGAAGAACTTGGGACTGGAAGGTGGCGTGATGTTAAGTTGCGAGCTTTTGAGAATGCTGATCATAGAACTTATGTAGATTTAAAGGATAAATGGAAAACACTAGTGCACACTGCGAAAATCTCCCCTCAACAAAGGAGAGGAGAGCCGGTACCTCAGGAGTTATTGGACAGAGTTTTAGGAGCACATGCTTACTGGTCTCAGAACCAAATCAAGCAACATGGAAAGCATCAAGGTGGAACAGGAGCAACATTGAAGATTACAGAAACCTCAGCGGAAAGGGTGTCCATTCATGTGTAG 1956 0.4269 MVLKKRVNNGFTGFQVPVIPKAPRSARGRGALNKTVEDGQVCAFEILASIAGKLLEESESSASSNASEANSQGVIVQDRQDEGKPSMMEGIHQGTCTDSIFTTDVASQNRDQKPLLHVKSDFSLEKVEIANVKTETVESYNKYGSYTNRLVEAPENFRESCNRKIKKGFRSDKCGLKDRLELYMSPSLADSKTNVKYPLHRKPFPTDSFAKRGNGIKIDFRDDDENFLRCTKVCTKSKAFRSPRRMAHRRIKNLLSSKYWNVAPKLKDCELSRSDLEVPLYRKRKTCNNSDRSRHSTIVKRRKFFDRVSGVTSDGGFSSESVSNSPEKGMDGHKPSSSSKLQVTEDSHVKFRIKSFKIPELYIEVPETATVGSLKRTVMEAVMAIIGGGMNVGVLLQGEDIGDDNRTLEQTGLSCNENLDALSFMLEPSSLLASLPVSCVGDPSSQCETSEPIRSPETPALDSGISDPVCDINLPTNQDTLVENNHDSTCSPTDTIVDKITPDHSRAIVALPASTEPLAMVPVSQKVKRSEFIHRRTRRPFSVTEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLDRVLGAHAYWSQNQIKQHGKHQGGTGATLKITETSAERVSIHV* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0098 651 Gene3D - 526 630 - -
Tpr3g0098 651 MobiDBLite consensus disorder prediction 61 84 - -
Tpr3g0098 651 MobiDBLite consensus disorder prediction 316 341 - -
Tpr3g0098 651 SUPERFAMILY Homeodomain-like 539 620 IPR009057 -
Tpr3g0098 651 MobiDBLite consensus disorder prediction 61 77 - -
Tpr3g0098 651 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 533 592 IPR017930 -
Tpr3g0098 651 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 639 - -
Tpr3g0098 651 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 639 IPR031105 -
Tpr3g0098 651 ProSiteProfiles Myb-like domain profile. 533 588 IPR001005 -
Tpr3g0098 651 SMART sant 537 590 IPR001005 -
Tpr3g0098 651 CDD SANT_TRF 539 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0098 Tpr-Chr3 1245633 1250844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0098 - - gmx:100814318 883.248