Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0095 ATGCCTTTCATCTCCAAAATTGAACGCCAATCCGATTACAATCGCTTCAGTTCATCCACTCCCATCGTTATCGACAATGGCGCTTCCTATTTCCGTATTGGATGGGCTGGTGAAACTGAACCTCGTGTTGTTTTCCGCAACATTGTTCAAAGACCACGACATAAATCCACAGGAGAAACTGTCACCATTGTTGGTGACCATGATCCAGCATTATTGAAATACTTTGACTGTACTCGCTCTGGACCGCGCTCAGCATTCGACAGCGATGTTGTTTTTCAGTTTGAAATAATGGAATATATTCTGGACTTCGCTTTTGATCGGTTGGGTGCAACAGGATCAGAGATTGATCATCCTATCCTGATTACAGAATGTGTATGCAACCCAGTTCACTCTCGAAGTAAAATGGCAGAACTTCTTTTTGAGACTTATGGAGTTCCATCTATAGCCTTTGGTGTTGATGCAGCATTCAGCTATAAATATAATCAACAACGAAGTGTTTGTGATAAAGATGGTCTTGCTATGTGTCCTGGATTCGCTACAACCCACGTGATTCCGTTTGTTGACGGAGAACCTATTTATAAAGGAAGTTGTCGTACTAATATTGGTGGATTCCACGTTACTAATTATTTAAAGCAACTTCTTTCACTTAAATATCCGTATCATTTGGCTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTACATTGCACTGGACTATGTTTCTGAAGCTCAATTGTTTCAGAAAGGAACGAAGGAGGCTGAAGAAAAAACCAAAATGTGGCAGCTCCCATGGGTGCCACCTCCAGTTGAGGCACCTCCTTCCGAGGAAGAGATTGCAAGAAAGGCAGCAAATAAAGAGAGACAAGGTCAAAGGTTGCGAGAAATGGCTGAAGCAAAGAGGTCATCAAAAATTAATGAGCTGGAAAACGAATTGCGTGGTTTGGAATTTCTTTTGAATCAACTTGGACATTTTCAAGAGAGTGATATACCATCTTTCTTAGCAGAGACTGGCTATGTCTCTCGGCAGGAAGTAGAATCTGCCCGTAGTAAGGTTGTGCAATCCTTAAGGAAACAAAAAGGTGAACAACCTGAAAGTGAAAAACCTGATGTTCCCTCTAATGAGAAGTATACTCTTATAAACATCCCTGATGACATGCTGACGGCAGAGCAGCTTGTTGAAAAGAAGAAACAGTTGTCACTCAAATCTATGTCTGATGGGAGGCAACGATTAAAACAGAAGCGCCAGGAAGAGTTACAGGAAAGAGTGAGGAAAGAACGGCTAGAAGAGGAGAAACACTCGAAGAACCCAGAGCTTTACTTGGAACAATTGCGTGCCAGATACAAGGACCTTTCGGAGAAAATTGACCAGCGTAAACGGCTCAAGACAAATGGAGGCTCTTCCACAAATGGAAATGGTTTGGCGGGTAGTGTTGGCCGTGGTGAGAGACTTAATGCTGCTCAAAGGGAAAGAATGCGCCTGCTGGCAACTGCTGCCTTTGATCGTGGTAAGGGCGAGGATACATTTGGTGCCAAAGATGAAGATTGGCAACTTTACAAATTGATGAGTAAAGATAATGATGACGACGACGAGGAACCAGATGAGGATACCACAGAGCTAGCCCGCATCTCTTCGAAGCTCCAGGCCTTGGATCCAAAATTTGTGGCCGCGGGAACCTCCCAACCTGCCGAGGCGCCACGTGCTCGTCCGCTCACCAAAGAAGATTTTCAGATTGTTTTTGGGGTTGAAAGGTTCAGGTGCCCTGAAATTTTGTTCAGTCCAAACTGGATTGGTGTTGATCAAGTTGGATTAGATGAGATGGCTGGGGTGTCGATAAGAAGGTTATCATGTAAAGACGAAAAGCTTGAAGAGAGAATGACTAATTCAATACTTGTGACTGGTGGAAGTTCTCTTTTCCCCGGCATCATTGAACGCCTTGAAGCTGGAATTCGGATGATAAGACCATGTGGTTCGCCTATAAAAATTGTTAGAGCGCTTGATCCAGTTATGGATGCATGGCGTGGCGCGTCTGCTTATGCATCAACCCCAGGTTTCTACACACAAACATTCACTAGGATGGATTATTATGAAAAAGGTGAAGACTGGCTTCGGAATTATCAACTTCGATATTCATTGTAA 2151 0.4338 MPFISKIERQSDYNRFSSSTPIVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKSTGETVTIVGDHDPALLKYFDCTRSGPRSAFDSDVVFQFEIMEYILDFAFDRLGATGSEIDHPILITECVCNPVHSRSKMAELLFETYGVPSIAFGVDAAFSYKYNQQRSVCDKDGLAMCPGFATTHVIPFVDGEPIYKGSCRTNIGGFHVTNYLKQLLSLKYPYHLARFTWEKVEDLKMEHCYIALDYVSEAQLFQKGTKEAEEKTKMWQLPWVPPPVEAPPSEEEIARKAANKERQGQRLREMAEAKRSSKINELENELRGLEFLLNQLGHFQESDIPSFLAETGYVSRQEVESARSKVVQSLRKQKGEQPESEKPDVPSNEKYTLINIPDDMLTAEQLVEKKKQLSLKSMSDGRQRLKQKRQEELQERVRKERLEEEKHSKNPELYLEQLRARYKDLSEKIDQRKRLKTNGGSSTNGNGLAGSVGRGERLNAAQRERMRLLATAAFDRGKGEDTFGAKDEDWQLYKLMSKDNDDDDEEPDEDTTELARISSKLQALDPKFVAAGTSQPAEAPRARPLTKEDFQIVFGVERFRCPEILFSPNWIGVDQVGLDEMAGVSIRRLSCKDEKLEERMTNSILVTGGSSLFPGIIERLEAGIRMIRPCGSPIKIVRALDPVMDAWRGASAYASTPGFYTQTFTRMDYYEKGEDWLRNYQLRYSL* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0095 716 Gene3D - 582 671 - -
Tpr3g0095 716 SMART actin_3 19 713 IPR004000 -
Tpr3g0095 716 MobiDBLite consensus disorder prediction 403 422 - -
Tpr3g0095 716 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Tpr3g0095 716 PANTHER ACTIN-RELATED PROTEIN 5 12 708 IPR027664 -
Tpr3g0095 716 Gene3D Actin; Chain A, domain 4 203 272 - -
Tpr3g0095 716 PANTHER ACTIN 12 708 IPR004000 -
Tpr3g0095 716 Coils Coil 445 465 - -
Tpr3g0095 716 MobiDBLite consensus disorder prediction 459 484 - -
Tpr3g0095 716 MobiDBLite consensus disorder prediction 357 379 - -
Tpr3g0095 716 Coils Coil 405 440 - -
Tpr3g0095 716 SUPERFAMILY Actin-like ATPase domain 170 709 IPR043129 -
Tpr3g0095 716 Pfam Actin 19 269 IPR004000 -
Tpr3g0095 716 Pfam Actin 581 708 IPR004000 -
Tpr3g0095 716 SUPERFAMILY Actin-like ATPase domain 18 161 IPR043129 -
Tpr3g0095 716 MobiDBLite consensus disorder prediction 357 376 - -
Tpr3g0095 716 Gene3D - 18 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0095 Tpr-Chr3 1207984 1213180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0095 582 703 Miscellaneous Gene Families AT2G42100 34.426 1.59e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0095 K11672 - gmx:100808396 1176.39