Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0093 ATGAACATGCCCACTTCTCCCCATGTTCTCCTACTTGTTCCACCTCTAACAATTATCATTCTCATAATGTTCCTTCAAATCCAAACAACCACTTCTTCTCTCTCATCTCCCAAACAAAAACCTTTCATATTGCCTTTAAAAATCCAAACACTTCCACATGGGGCAGTTTCACTTCCAACACCTTCTTCACATAAAATCTCTTTCCACCACAATGTAACCTTAACAGTTTCACTAACACTTGGCTCACCCCCACAGAATGTTACCATGGTCCTTGACACAGGGAGTGAACTCTCATGGCTTCATTGCAAAAAGCTTCCAAATTTAACTTCCATTTTCAACCCACTTCTCTCTAAAACATATACTCCTATACCTTGTACTTCACCCGTTTGCATGACCCGAACCCGAGATTTCCCTGTACCCGTTTCATGTGACCCGAAAAAACTCTGCCATGCTACAATCTCCTACGCCGATGCAAGCTACATCGAAGGAAACCTCGCCACCGAGACATTTTTCGCCGACGGGTCAGCACAACCCGGAACCATATTCGGGTGTATGGATTCCGGGTTCAGCTCTAATACAAATGAAGACTCCAAAACAACCGGGTTAATGGGTATGAACCGTGGCTCTCTCTCATTTGTAACCCAAATGGGGTTACCCAAATTCTCGTATTGCATCTCCGGTAAAGACTCCACCGGCGTTTTGCTCTTCGGCGAGGCGAATTTCAATTGGCTTGGACCATTGAAATACACTCCTCTAGTCAAAATGACAACCCCATTACCCTATTTCGATCGAGTCGCGTATACAGTTCAACTCGAGGGAATTAGGGTCGGGAATAAGCTACTTCAATTACCCAAATCAATTCTCGCACCGGATCATACCGGTGCGGGTCAAACCATGGTTGATTCGGGTACCCAATTCACATTTCTTTTAGGACCAGTTTACACAGCTTTACGAGAAGAATTTCTCTCTCAAACAAAAGGGTTGTTAACCCTTTTGAACGACACAAATTTCGTGTTCCAAGGAGCTATGGATTTATGCTATCGTGTTTCGGGTTCGGGTTCAAATTCGGGTCGGGTGGGTCTTCCGCCATTACCAGCAGTGACACTTATGTTTGAAGGAGCGGAAATGAGTGTTTCAGGAGAGAGATTATTGTATAGAGTAGTTGATGACGTGGCAACAAGAAAGTGGAACAATGATTTGGTGTATTGTTTCACGTTTGGAAATTCTGACTTGTTGGGAATTGAGGCTTATGTTATTGGACATTATCATCAAATGAACGTGTGGATGGAGTTTGATTTGGTCAACTCTAGAGTTGGATTTGCTGATACTAGATGTGAACTAGCAAGTCAACGTTTAGGGATTTAG 1365 0.4344 MNMPTSPHVLLLVPPLTIIILIMFLQIQTTTSSLSSPKQKPFILPLKIQTLPHGAVSLPTPSSHKISFHHNVTLTVSLTLGSPPQNVTMVLDTGSELSWLHCKKLPNLTSIFNPLLSKTYTPIPCTSPVCMTRTRDFPVPVSCDPKKLCHATISYADASYIEGNLATETFFADGSAQPGTIFGCMDSGFSSNTNEDSKTTGLMGMNRGSLSFVTQMGLPKFSYCISGKDSTGVLLFGEANFNWLGPLKYTPLVKMTTPLPYFDRVAYTVQLEGIRVGNKLLQLPKSILAPDHTGAGQTMVDSGTQFTFLLGPVYTALREEFLSQTKGLLTLLNDTNFVFQGAMDLCYRVSGSGSNSGRVGLPPLPAVTLMFEGAEMSVSGERLLYRVVDDVATRKWNNDLVYCFTFGNSDLLGIEAYVIGHYHQMNVWMEFDLVNSRVGFADTRCELASQRLGI* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0093 454 Gene3D Acid Proteases 244 450 IPR021109 -
Tpr3g0093 454 PANTHER ASPARTYL PROTEASE-RELATED 18 453 IPR001461 GO:0004190|GO:0006508
Tpr3g0093 454 CDD pepsin_A_like_plant 73 445 IPR034161 -
Tpr3g0093 454 Pfam Xylanase inhibitor N-terminal 76 237 IPR032861 -
Tpr3g0093 454 SUPERFAMILY Acid proteases 75 445 IPR021109 -
Tpr3g0093 454 Gene3D Acid Proteases 66 237 IPR021109 -
Tpr3g0093 454 Pfam Xylanase inhibitor C-terminal 266 441 IPR032799 -
Tpr3g0093 454 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 18 453 - -
Tpr3g0093 454 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 89 100 IPR001969 GO:0004190|GO:0006508
Tpr3g0093 454 ProSiteProfiles Peptidase family A1 domain profile. 74 441 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0093 Tpr-Chr3 1140932 1143031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0093 75 253 Miscellaneous Gene Families AT1G44130 31.088 1.55e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0093 - - gmx:100783835 663.299