Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0090 ATGTCAGGTGTTAATGTTACGGGTGGAAATGGGACGATACAGCTCATACTCGTAAACAACTGCCAAGAGAGTGTATGGCCAGGAATTCTAAGCAACGGCGAACACCCTACAATCAAAGACGGCGGATTCCACCTCCCAAGCGGCGAAGAGCTTGTTCTCCGAGTCCCTAACCACTGGGCAGGTAGAATCTGGGGTAGACAAGGCTGTTATTTCAACGAAACAACCGGAAAAGGCTCGTGTCAAACCGGAGACTGCAATGGCCAATTAAAATGTAAGGGAATTGGTGGTGTCCCTCCAGCTACACTTATTGAAATGACATTTGGGACCTCACAATCATCTTTACATTTCTATGATGTTAGTTTAGTTGACGGTTTTAACCTTCCAATGTCAATGAAACCTATTGGTGGTAGTGTTGGTTGTGGTATTGCTTCTTGTCAAACTGATTTGAATGGTTGTTGTCCATCTTCACTTGCTTTGAAACATGATGGAAAAGTTGTTGGATGCAAAAGTGCTTGTTTGGCTACAAAATCAGATAAATATTGTTGCACTGGTGAATTTGCTGATCCAAAAATTTGCAAGCCAACTATGTTTGCTCTTGTTTTTAAGAGTGTTTGTCCTCATGCTTATAGCTATGCTTATGATGATTCAACTGCGCTTATGAGGTGTTTGGCAACTACATATGTTATTACCTTTTGCCCTGCATGA 705 0.4199 MSGVNVTGGNGTIQLILVNNCQESVWPGILSNGEHPTIKDGGFHLPSGEELVLRVPNHWAGRIWGRQGCYFNETTGKGSCQTGDCNGQLKCKGIGGVPPATLIEMTFGTSQSSLHFYDVSLVDGFNLPMSMKPIGGSVGCGIASCQTDLNGCCPSSLALKHDGKVVGCKSACLATKSDKYCCTGEFADPKICKPTMFALVFKSVCPHAYSYAYDDSTALMRCLATTYVITFCPA* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0090 234 PRINTS Pathogenesis-related protein signature 14 26 IPR001938 -
Tpr3g0090 234 PRINTS Pathogenesis-related protein signature 62 73 IPR001938 -
Tpr3g0090 234 PRINTS Pathogenesis-related protein signature 115 131 IPR001938 -
Tpr3g0090 234 PRINTS Pathogenesis-related protein signature 223 232 IPR001938 -
Tpr3g0090 234 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 11 234 - -
Tpr3g0090 234 ProSiteProfiles Thaumatin family profile. 15 234 IPR001938 -
Tpr3g0090 234 ProSitePatterns Thaumatin family signature. 76 91 IPR017949 -
Tpr3g0090 234 PANTHER OS03G0233200 PROTEIN 11 234 IPR001938 -
Tpr3g0090 234 SMART tha2 15 233 IPR001938 -
Tpr3g0090 234 SUPERFAMILY Osmotin, thaumatin-like protein 14 233 IPR037176 -
Tpr3g0090 234 CDD TLP-PA 14 232 - -
Tpr3g0090 234 Gene3D Thaumatin 14 233 IPR037176 -
Tpr3g0090 234 PIRSF PR5 4 234 IPR001938 -
Tpr3g0090 234 Pfam Thaumatin family 19 233 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0090 Tpr-Chr3 1118128 1118832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0090 6 233 Receptor kinase-like Gene Family AT5G38280 40.426 1.46e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0090 - - gmx:100809093 366.311