Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0087 ATGGATAATCTTGAACCGGTACCAATTTCATCACAAAAACATGATCCAGCATGGAAGCATTGTCAGTTGTTTAAGAATGGTGAAAAAGTGCAACTAAAATGCATATATTGTCTCAAGTTTTTTAAAGGTGGTGGGATTCATAGGTTTAAGGAACATCTTGCTTGTCAGAAAGGGAATGCATCAATGTGCAGCAGTGTTCCTGCTGATGTTAGGCAACTTATGCAGCAGAGTTTGGATGGTGTTGTGGTGAAAAAGAGGAAGAGACAGAAAATTGAGGATGAGATTATGAATGTTAATCCTTTAGCTACTGTTTTGAATGGTGGTGGTTCAAATCAGATGGATGTCAATCTTGGGGGGCAGTCTTTTGGAGTTCATGATTCGGCGGAACAAAATTTGGGTCAGTTGTTGCATACTCCTGGTGATGGAATGAGTAAAAATGTGGAAAGAAGGAAGAAGATTAGAGCTACTAAGAATAATAATAATAATAATAATAATAATTATGCAGCAGCAGCATCGGTTTATACAACAAACTCTGAGCCTGAGCCTGTTGTTGCCCCCATGGAGAAAAGTGCATTTTTCCCTAAAAAGGTGGACAATCGCATTCATATGGCAATAGGTCGGTTTTTGTATGATATTGGTGCGCCTTTTGATGCTGTGAATTCGGTCTATTTTGATCAAATGGTTGAAGCAATTGCTTCTGGGGGCTCAGATTTTCAACGTCCCTCGCATCATGAACTTCGGGGTTGGGTCCTGAAAAATTCCGTGGAAGATGTGAAGAATGAAATAGATAGATGTAAGATGACATGGGGGAGGACTGGCTGTTCCATTTTGGTTGACCAATGGACTACAGAAGCTGGTAGAATACTGATAAGTTTTTTGGCTTATTGTCCTGAAGGTGTAGTCTTTCTGAAATCCTTGGATGCGACCGAGATAATGACTTCAGCGGAATTTTTACATGAGGTGATAAAACAAGTAGTAGAGGAAGTTGGAGTAGCTCAAGTTGTGCAAGTGATTACATCAGGCGAAGAACAGTATGCTGTTGCTGGGAAAAGGCTGACTGATACTTACCCTAGTCTTTATTGGAGCCCTTCTGCGGCTCATTGCATTGATTTAATACTTGAAGATTTTGGAAATCTTGAGTGGATTAGTGCGGTAATTGAACAAGCTAAATCTATAACAAGATTTGTCTACAATTACAGTGCAATTTTGAATATGGTCAGAAGGTATACTTTAGGGAATGATATTGTGGATCCCTCTTTCTCACGCTTCGCGACAAACTTTACCACGTTGAAACGAATGGTTGATCTTAAACACAATTTACAGTCCATGGTTACTTCTCAGGAATGGATGGATTGCCCATATTCAAAGAAAACAGCAGGTTTAGAAATGTTAGATACCCTAAGTAATCAAGACTTTTGGTCACAGTGCGATTTGATTGTTCGCCTGACACATCCTCTCTTGAGAATCCTGCGAATAGCTTCCAGCGAGATGAGACCTGCAATGGGATACACTTATGCTGGAATGTACCGAGCAAAAGAAGCGATTAAAAAAGCACTTATAAAGAGGGAGGATTATATGGTGTACTGGAATATTATACATCAAAGATGGGAAAGGCTGTGGCATCATCCTCTTCATGCTTCAGGCTTCTTTCTTAATCCGAAGTTCTTCTATAGCATTCAAGGGGATGTACACAATGAGATTCTCTCAGGGATCTTTGACTGCATAGAGAGATTGGTACCTGATACAAGAGTCCAAGATAAAATTATCAAAGAGTTAAACTTGTACAAGTCTGCTGCAGGAGACTTTGGGAGAAAGATGGCAATCAGAGCCAGAGATAATCTTCTTCCTTCTGAATGGTGGTCAACATATGGGGGAGGCTGCCCTAACTTGTCACGCTTAGCAATTCGAATTCTTAGCCAAACATCAAGTGTGATGTTCTGCAAGAGAAATCAAGTTCCTTTTGAACAGATAATCAATACAAGGAATTGTATAGAGCGCCAACATCTTACCGATCTTGTCTTTGTTCATTACAACTTACGACTGAGACAAATGTTTACGAGTAAAGAACAAGAATCTAATGATCCCTTGTCATTCGACAACATTTATAATGTTGAAGACTGGGTCAGGCCAAGGGATTTATACTTCGAAGAGTACGGGAACTCAGATTGGATGGCACTAGATTCATATTCCATTAACACAATGCTTTTAAGGCCTTTAAATAATGAACCTGAAGAAATGTGTGAAGGGTTTGATGATCAAGAAATTTTCATGAGTCTGAAAGATGGTGAGGATGAGCATATCGGAGTCAAGTTTGGAAATCATTAG 2325 0.3961 MDNLEPVPISSQKHDPAWKHCQLFKNGEKVQLKCIYCLKFFKGGGIHRFKEHLACQKGNASMCSSVPADVRQLMQQSLDGVVVKKRKRQKIEDEIMNVNPLATVLNGGGSNQMDVNLGGQSFGVHDSAEQNLGQLLHTPGDGMSKNVERRKKIRATKNNNNNNNNNYAAAASVYTTNSEPEPVVAPMEKSAFFPKKVDNRIHMAIGRFLYDIGAPFDAVNSVYFDQMVEAIASGGSDFQRPSHHELRGWVLKNSVEDVKNEIDRCKMTWGRTGCSILVDQWTTEAGRILISFLAYCPEGVVFLKSLDATEIMTSAEFLHEVIKQVVEEVGVAQVVQVITSGEEQYAVAGKRLTDTYPSLYWSPSAAHCIDLILEDFGNLEWISAVIEQAKSITRFVYNYSAILNMVRRYTLGNDIVDPSFSRFATNFTTLKRMVDLKHNLQSMVTSQEWMDCPYSKKTAGLEMLDTLSNQDFWSQCDLIVRLTHPLLRILRIASSEMRPAMGYTYAGMYRAKEAIKKALIKREDYMVYWNIIHQRWERLWHHPLHASGFFLNPKFFYSIQGDVHNEILSGIFDCIERLVPDTRVQDKIIKELNLYKSAAGDFGRKMAIRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSVMFCKRNQVPFEQIINTRNCIERQHLTDLVFVHYNLRLRQMFTSKEQESNDPLSFDNIYNVEDWVRPRDLYFEEYGNSDWMALDSYSINTMLLRPLNNEPEEMCEGFDDQEIFMSLKDGEDEHIGVKFGNH* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0087 774 Pfam hAT family C-terminal dimerisation region 591 679 IPR008906 GO:0046983
Tpr3g0087 774 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 6 745 - -
Tpr3g0087 774 SUPERFAMILY Ribonuclease H-like 274 681 IPR012337 -
Tpr3g0087 774 ProSiteProfiles Zinc finger BED-type profile. 12 70 IPR003656 GO:0003677
Tpr3g0087 774 PANTHER OSJNBA0013A04.12 PROTEIN 6 745 - -
Tpr3g0087 774 Pfam Protein of unknown function (DUF 659) 241 392 IPR007021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0087 Tpr-Chr3 1096661 1100261 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0087 - - aprc:113850304 1259.97