Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0079 ATGGTGAAGAAGAAGATGAATCAAGATCGGTTGGAACCTAGTCATGACCCTCTTAAAATAGCAAGATTACCTTTTACAGAAAAAATTGGTGACATGGTTTCAATCTCAATAAGAGTTGGCATACTTATCTGCCTTATAGCATCCATAACACTTGCTTTCCATTCAACATTCGCTAAACCAGACCGATGGTTTCCATTACCCGAACATTTACACGTTATACAGAATGTTTCAGTCATTCAAATTGACAATGAACCAACAAACATCTCACATATTATATTCGGCATTGCCGGATCATCAAACACGTGGCATAGCCGTAGTAACTACAGCAAACTTTGGTGGAATCCAAACACTTGCAGAGGTTTTGCTTGGCTCGACAAGAGACCGGACGATTTTAAGTCGGACCCTATGATAATTCCGTATAAAATCTCAAAAGGTTGGATGCGGTTCAGACACGTGCACTCTGCATCAGCAGTTCGGATAGCGAGGATAGTTTACGAAAGCTTTAGACTTGGTCTGCCAAATGTAAGGTGGTTTGTAATGGGAGACGATGATACAGTGTTTTTCCCCGAGAATTTAGTTACCGTGTTGGGAAAATATGATCACAATCAATTGTATTATATTGGTGGAAATTCCGAGAGTGTGGAGCAAGATTTGATGCATTGTTTTGATATGGCTTTTGGTGGTGGTGGAATTGCCATTAGTTATGCACTAGCAGTTAGACTAACCCAAATTATGGATTCTTGTCTTCATAGATACTATTATTTTTATGGCTCTGATCAAAGAATTTGGGCTTGTGTAAATGAATTAGGAGTACCTCTTACAAGAGAAAGAGGATTCCATCAGCTTGACATTAAAGGGAATCCTTATGGTATTTTAGCCGCGCACCCTTTGGCACCACTCGTGTCACTTCATCACCTTGATCAATTGAACTCGTTGTTTCCGGACCAAAGTCAAATGAATTCATTGGGAAAGCTCATCAGTGCATACCACCTTGACCCTGCAAGGATAGTGCAGCAAAGTGTTTGTTATGATCATAGGCGTAAATGGTCGATATCTATTTCATGGGGCTACACAATACAAATCTATACAACGTTGGTGATAGTAGCAGATTTGCAGATGCCATTTCAGACGTTTAAAACATGGAGAAGTTCGAGTGATGGTCCTTTCACGTTTAATACTCGATGGCTGAACCCTGACGAATGCCAGCAGCCATCTATATTTTTCCTGGATCAGGTTAGAATGGCGGGCACTGGAAGTGTCACTACCTATAAGAGATATTTTGGCAAGGAAGGAAAGAACTGCAAGAGAGCAGATGGAGAAGTGCAGAGAATTAAAGTTTCTGTCTTGAAACTGGATTCAGAATATTGGAAGAATGTACCACGGAGGCAATGCTGCCAAATTATGAATGGTGGAAGCATAAAGGATGGAAATGTGCATATCAGAATTAGGAAATGCAGACCTCAAGAAACAATTACTATTTAG 1482 0.4028 MVKKKMNQDRLEPSHDPLKIARLPFTEKIGDMVSISIRVGILICLIASITLAFHSTFAKPDRWFPLPEHLHVIQNVSVIQIDNEPTNISHIIFGIAGSSNTWHSRSNYSKLWWNPNTCRGFAWLDKRPDDFKSDPMIIPYKISKGWMRFRHVHSASAVRIARIVYESFRLGLPNVRWFVMGDDDTVFFPENLVTVLGKYDHNQLYYIGGNSESVEQDLMHCFDMAFGGGGIAISYALAVRLTQIMDSCLHRYYYFYGSDQRIWACVNELGVPLTRERGFHQLDIKGNPYGILAAHPLAPLVSLHHLDQLNSLFPDQSQMNSLGKLISAYHLDPARIVQQSVCYDHRRKWSISISWGYTIQIYTTLVIVADLQMPFQTFKTWRSSSDGPFTFNTRWLNPDECQQPSIFFLDQVRMAGTGSVTTYKRYFGKEGKNCKRADGEVQRIKVSVLKLDSEYWKNVPRRQCCQIMNGGSIKDGNVHIRIRKCRPQETITI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0079 493 Pfam Protein of unknown function, DUF604 216 465 IPR006740 -
Tpr3g0079 493 Gene3D - 79 334 - -
Tpr3g0079 493 PANTHER BNAA05G27650D PROTEIN 22 491 - -
Tpr3g0079 493 PANTHER FRINGE-RELATED 22 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0079 Tpr-Chr3 1007251 1011792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0079 15 491 Glycosyltransferase AT3G11420 52.610 1.41e-177 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0079 - - gmx:100802549 755.362