Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0066 ATGGATGGTGAAGAGTGTGAAGCATTGGAGAAATTGGTTTACATGTGGGGGTACTTACCGGGAGCTTTACCGCAAAGGACGCCGTTGTTAACGCCGTTTAGGGTTCCGGTGTCTGGTTATAACTGGAAAGATGTTTCCGGTGGTGGTTGTGGATTTGCAATGGCTATATCTGAGCCAGGAAAGCTCATAACATGGGGTTCTACAGATGATCTAGGCCAAAGCTATGTGACGTCCGGCAAGCACGGGGAAACTCCAGAGCCATTCCCTCTTCCAAATGAAGTTTCTATTGTAAAAGCTGCTGCTGCATGGGCACATTGCGTTGCTGCAACAGATTGTGGAGAAGTTTACACATGGGGATGGAAGGAATGTATTCCTTCTGGGAAGGTATTTGGCGAAACTTTGTCAGGGGTAAGTCCTGAAAAAGATGCACAAGGAAAGCAGGGTTCATTCTTGACAGAGCAAGGAGGAACTGTTTCTGGTGGAGAAATAAGTACTAAGAGAAGGAAAGTATCTTCAGCAAAGCAAGCAGCTGAAACCTCATCATCTGGTGATGATATTCTAACAGCAATGCCATGCCTTGTCACACTTAATCCAGGGGTAAGGATAACAAGTGTTGCTGCCGGTGGGCGGCATACCCTAGTATTGTCAGATATAGGACAGGTGTGGGGTTGGGGCTATGGAGGTGAAGGGCAGCTTGGTTTGGGCTCCAGAATACGTATGGTGTCCTCTCCTCATCTTATTCCTTGTATTGATTCCTCTTCTTATGGCAAAGATATATCAGCATCACTGTCTCAAGGAAGCATGAGTTCAGAGGGACAAAATTTTAGGATTCCTGGAAGTTGTATAAAGGCTATTGCCTGTGGTGGTCGACATAGTGCAGTAATCACAGATGCTGGAGCTGTGCTTGCGTTTGGTTGGGGACTTTATGGACAGTGTGGGCAAGGAAGTACAGATGATGAACTAAGTCCGACCTGCGTGTCTTCCTTATTGGGTATTCGAATAGTGGGAGTTGCTGCAGGTCTGTGGCATACTGTTTGTACATCTGCTGATGGTGATGTATATGCATTTGGTGGAAACCAGTTTGGGCAGCTGGGAACTGGTTCTGATCAAGCTGAGGTTCTACCAAGACTACTGGATTGTCAGAGCTTGGAAAATGTGAACGTAAAGAGCATATCTTGTGGGGCTCGTCACACTGCTCTAGTAACAGATAATGGAAAAGTCTTCAGCTGGGGATGGAACAAGTATGGGCAGCTGGGCCTTGGGGACGTGATTGACCGCAACATTCCTTCCGAAGTCACAATTGAAGGTTGTGTAGCTAAAAATGTTGCATGTGGTTGGTGGCACACTCTTCTTTTGGCCGAGTCACCCACTTGA 1374 0.468 MDGEECEALEKLVYMWGYLPGALPQRTPLLTPFRVPVSGYNWKDVSGGGCGFAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPNEVSIVKAAAAWAHCVAATDCGEVYTWGWKECIPSGKVFGETLSGVSPEKDAQGKQGSFLTEQGGTVSGGEISTKRRKVSSAKQAAETSSSGDDILTAMPCLVTLNPGVRITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLIPCIDSSSYGKDISASLSQGSMSSEGQNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIVGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAEVLPRLLDCQSLENVNVKSISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAESPT* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0066 457 MobiDBLite consensus disorder prediction 138 182 - -
Tpr3g0066 457 Gene3D - 263 456 IPR009091 -
Tpr3g0066 457 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 60 112 IPR000408 -
Tpr3g0066 457 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 8 457 - -
Tpr3g0066 457 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 8 457 - -
Tpr3g0066 457 MobiDBLite consensus disorder prediction 140 166 - -
Tpr3g0066 457 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 405 455 IPR000408 -
Tpr3g0066 457 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 205 215 IPR000408 -
Tpr3g0066 457 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 219 298 IPR000408 -
Tpr3g0066 457 Gene3D - 177 262 IPR009091 -
Tpr3g0066 457 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 351 404 IPR000408 -
Tpr3g0066 457 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 285 295 IPR000408 -
Tpr3g0066 457 Pfam Regulator of chromosome condensation (RCC1) repeat 350 400 IPR000408 -
Tpr3g0066 457 Pfam Regulator of chromosome condensation (RCC1) repeat 404 452 IPR000408 -
Tpr3g0066 457 Pfam Regulator of chromosome condensation (RCC1) repeat 299 346 IPR000408 -
Tpr3g0066 457 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 299 350 IPR000408 -
Tpr3g0066 457 PRINTS Chromosome condensation regulator RCC1 signature 96 109 IPR000408 -
Tpr3g0066 457 PRINTS Chromosome condensation regulator RCC1 signature 205 221 IPR000408 -
Tpr3g0066 457 PRINTS Chromosome condensation regulator RCC1 signature 340 358 IPR000408 -
Tpr3g0066 457 PRINTS Chromosome condensation regulator RCC1 signature 400 421 IPR000408 -
Tpr3g0066 457 SUPERFAMILY RCC1/BLIP-II 189 455 IPR009091 -
Tpr3g0066 457 Pfam Regulator of chromosome condensation (RCC1) repeat 202 231 - -
Tpr3g0066 457 SUPERFAMILY RCC1/BLIP-II 12 123 IPR009091 -
Tpr3g0066 457 Gene3D - 8 134 IPR009091 -
Tpr3g0066 457 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 391 401 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0066 Tpr-Chr3 757448 765882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0066 - - gmx:100778841 799.275